Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00443 ATGGGAGAGTGGAAGAATTTGAGAGTTCTGGGAAGAGGTTCATATGGAACGGTGTACCTTGCTAGTATACAAAATTTGAAGGTTGCTGTGAAGAGTTCAAGTAATTTTTTTCTCTCAGTTGCCTCATTGCATAAAGAGAAAAATATCTTAGAGTTATTCAAAGGGTGCAAGGAAATCCTTCAGTATTATTTTTACAAACACACTGTGGAAGGAGGTTATGTTATCTCTAATCTTTGTATGGAATATGCTCCATATGGTTCCTTAGGTGATCTGATAAGGGAAGAAGGACCATTGTCAGAGAAGGAAGTGATAAGCTATACCCACATGCTTCTGAAGGGACTTTCCTGTATTCATAAAAAAGGAGTTGTTCATTGTGACCTAAAACCAGACAACATTCTTCTCTTTCCTTCATCAGATGGTCATTCAAAGTATCAGTTAAAGATTGCTGATTTTGGATTGTCAAGGACAAGGGAAGAGGAAAATAGTAACCTTGGGGAGATCAAATTTAGAGGGACACCTCTTTATATGTCTCCTGAGTCAATCATAGGTCTGGTTGAATCATCCTTGGATATATGGTCTCTTGGATGCATTGTTATTGAGATGATCACTGGTTTTCCTGCATGGAGGAATGTGCAAACCAAAGAAGAACTCATGTGGAAGCTTGGATACCTTCAAGAAGCACCAACTACACCCTATGGACTTAGTTGGGATTGTGCAAATTTCCTGAGCAAGTGTTTTGTCAAAGATTATAGGTTGAGATGGAGTGCTTCAATGCTTCTTCACCATCCTTTCATTCAGAAACAGTATCACACCTCTCCTCTGTATAATCCTTCATCGTTCTTTTCCTATGATATTGTTAGTTATGTATGA 870 0.3839 MGEWKNLRVLGRGSYGTVYLASIQNLKVAVKSSSNFFLSVASLHKEKNILELFKGCKEILQYYFYKHTVEGGYVISNLCMEYAPYGSLGDLIREEGPLSEKEVISYTHMLLKGLSCIHKKGVVHCDLKPDNILLFPSSDGHSKYQLKIADFGLSRTREEENSNLGEIKFRGTPLYMSPESIIGLVESSLDIWSLGCIVIEMITGFPAWRNVQTKEELMWKLGYLQEAPTTPYGLSWDCANFLSKCFVKDYRLRWSASMLLHHPFIQKQYHTSPLYNPSSFFSYDIVSYV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00443 289 Gene3D Transferase(Phosphotransferase) domain 1 1 283 - -
Spst7g00443 289 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 267 - -
Spst7g00443 289 Pfam Protein kinase domain 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00443 289 ProSitePatterns Protein kinases ATP-binding region signature. 10 31 IPR017441 GO:0005524
Spst7g00443 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Spst7g00443 289 SMART serkin_6 4 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00443 289 ProSiteProfiles Protein kinase domain profile. 4 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00443 289 SUPERFAMILY Protein kinase-like (PK-like) 2 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00443 Spst-Chr7 3548694 3549563 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00443 3 265 MAP Kinase Kinase Kinase AT4G36950 40.860 8.88e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst7g00443 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00443 - - gmx:102664043 388.267