Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst7g00437 | ATGCAGCATCAGATGGAGATTGAGAACTCTGAGCTCTTCCAAATCCTCTCAAACACCAACCATTCTTTCTTTCCTGAACCTGCATCATCAACCATGCAACAAAGCTTCTCTGGTTCCTTTTCTTGTTACCCTTTTGAAGCATTTGATGCACCACCTCATGAAGACAAAGCTCTTGCTGCTTTGAGGAACCACAAAGAGGCTGAGAAGAGAAGAAGGGAAAGAATCAACTCCCACCTCAACAAGCTTCGCACTCTTCTTCCTTGTAATTCCAAGACAGACAAGGCTTCACTCTTGGCGAAGGTGGTCCAAAGGGTGAAGGAGTTGAAGCAGCAGATATCTGAAACAACCGAATCCGAAACGTTTCCTTCGGAGACCGACGAGATCTCTGTTCTCTCCACCACCGGTGACGACGGTGGTGGTGACGGTGACGGACGACTCACATTGAAGGCGTCGTTGTGCTGTGAAGACCGCTCCGACCTCATCCCTGACCTCGTGGAAATCCTCAAGTCTCTGCACCTCCGAACGCTCAAAGCCGAAATGGCCACGCTCGGAGGAAGAACCCGCAACGTTCTGGTGGTGACCACCGACAAAGAGCATGGCGTTGAATCAATCAAGTTCCTGCACAACTCGTTGAAGTCTCTGCTGGAACAATCCAATTCCAACGCCATTTCGAAACGACGCCGTGTGTTAGGCCCTAACTCCATCGCTTAA | 711 | 0.4993 | MQHQMEIENSELFQILSNTNHSFFPEPASSTMQQSFSGSFSCYPFEAFDAPPHEDKALAALRNHKEAEKRRRERINSHLNKLRTLLPCNSKTDKASLLAKVVQRVKELKQQISETTESETFPSETDEISVLSTTGDDGGGDGDGRLTLKASLCCEDRSDLIPDLVEILKSLHLRTLKAEMATLGGRTRNVLVVTTDKEHGVESIKFLHNSLKSLLEQSNSNAISKRRRVLGPNSIA | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst7g00437 | 236 | FunFam | transcription factor bHLH30 | 54 | 117 | - | - | |
Spst7g00437 | 236 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 32 | 232 | IPR045847 | GO:0003700|GO:0006355 | |
Spst7g00437 | 236 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 59 | 108 | IPR011598 | GO:0046983 | |
Spst7g00437 | 236 | Pfam | Helix-loop-helix DNA-binding domain | 63 | 108 | IPR011598 | GO:0046983 | |
Spst7g00437 | 236 | CDD | ACT_UUR-ACR-like | 151 | 218 | - | - | |
Spst7g00437 | 236 | Coils | Coil | 98 | 118 | - | - | |
Spst7g00437 | 236 | Gene3D | - | 54 | 120 | IPR036638 | GO:0046983 | |
Spst7g00437 | 236 | CDD | bHLH_AtAIG1_like | 54 | 130 | - | - | |
Spst7g00437 | 236 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 62 | 118 | IPR036638 | GO:0046983 | |
Spst7g00437 | 236 | SMART | finulus | 65 | 114 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst7g00437 | Spst-Chr7 | 3483219 | 3484837 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst7g00437 | 54 | 219 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G41130 | 71.006 | 6.41e-72 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Spst7g00437 | HLH | 3.3e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst7g00437 | - | K22484 | pvu:PHAVU_007G243000g | 333.569 |