Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00434 ATGGCGAAACGCTTGATTCCTCTCTTCAACCGTGTTTTGGTCGAGAAAATCGTCCCTCCTTCAAAAACCAACACTGGGATTCTGTTACCTGAATCCTCCTCCAAGTTGAATTCTGGAAAAGTTATTGCTGTTGGTCCTGGAATTCATGATAAGGAAGGGAAGCTAATTCCTGTAGCTGTAAAGGAAGGTGACACTGTACTTTTACCTGAATATGGAGGAACTGAGGTGAAGCTTGATGACAAAGGGGTATTGTGGGAAGCATGGGACACGATTGTCTATATGAGGGAGGAAGAGAAGAAAAATGGAAAAAAAATGGTTCTGGAAGTGGCTTTCCTTCCAAAAATGCTTTTAGCAGCACCAGTGACCTCTCTGGTTGGGAAAATGGAGCTTCATGAGCAGCTCCTCTTATGGTGGCAAATGATAAGATGTCTCCATATACTTGTGTCCAACCAGCCACCTGAAAATTATCACAGAAGGTTTGAGTTGAATTGCAATGCACTAAAATGTAGGGAAACTTTTCAGGGTCTTAATCCATTCCAAGTCTTAACCTGTCTTCCCTCAAACCAGGTTCTATATGACACTGTTGTGTTCAGTCCAAAGTCCTTGGCCAATTCATTTACCAGGGTTCTTGTCCCAATTAATGGGATGACTGAATCTTGA 660 0.4242 MAKRLIPLFNRVLVEKIVPPSKTNTGILLPESSSKLNSGKVIAVGPGIHDKEGKLIPVAVKEGDTVLLPEYGGTEVKLDDKGVLWEAWDTIVYMREEEKKNGKKMVLEVAFLPKMLLAAPVTSLVGKMELHEQLLLWWQMIRCLHILVSNQPPENYHRRFELNCNALKCRETFQGLNPFQVLTCLPSNQVLYDTVVFSPKSLANSFTRVLVPINGMTES 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00434 219 CDD cpn10 4 81 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst7g00434 219 Pfam Chaperonin 10 Kd subunit 5 82 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst7g00434 219 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 82 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst7g00434 219 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst7g00434 219 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst7g00434 219 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst7g00434 219 SMART Cpn10_2 4 84 IPR020818 GO:0005524|GO:0006457|GO:0044183
Spst7g00434 219 FunFam 10 kDa chaperonin, mitochondrial 1 96 - -
Spst7g00434 219 SUPERFAMILY GroES-like 4 91 IPR011032 -
Spst7g00434 219 Gene3D GroES chaperonin 1 105 IPR037124 GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00434 Spst-Chr7 3460341 3465013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00434 7 98 Calmodulin-binding Proteins AT5G20720 39.785 6.35e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00434 K04078 - gmx:100306384 150.984