Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00433 ATGAAGAACTCTGGTTCGGAAAGTTGTATGTTGTTCGCTGAGAGCGATGAAGACATGGAGAAGGATCTGCATAGAGATGAGAATGATGGAAACGGTTCGGATTATTCGAATGATTCCAATGAAAACCAGTCAATGAGAAAACCCAGCAGCTACAGCATCGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGTGTACCATCACCAAATATTGGATTTCTTGGCACCACATCACTGTCAAGATTAGGAAGTTCTTTTTTATCTTCATCTTTGACAAGGAAGCAAACTCTTGAAATAGTACAACCAGAGAAAAAACCACTCCTGCAAACCTCAGACGAGGAGCAACTGCGGAAATCTATCATCAGGAAAGATGCTTCCAAGGTTTCTCATGAAGCTCACATACCTGGTCAATGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGAATAGGAATCCTTTCAACCCCTTATGCAGTAAAAGAAGGAGGATGGATTGGTCTTTCAGTGTTGTTATTTTATGCAGTTTTTTCGTATTATACTGGTTTGCTCCTGCGTTACTGCTTGGATAGTGCACCTGGCCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACCACTGGACGTGTCCTCATTTCGGCTTGTTGCATAGAGTACATAATTGTGGAGAGTGACAACTTATCTACGTTATTTCCAAATGCATACATTAATTTGGGTGAAATTGAAGTGAATGCACACGTACTGTTTGCGATATTGACCTCAGTGGCTCTTCTTCCAACCGTTTGGCTCCGTGACCTACGCATTCTCAGTTACATCTCAGAACGTATCGTTGTGGCTGTAGCTTGTGGAGTCATTGCAACGGTTGTAGTGGTTATATGCTTGTTCTGGGTTTGCTTGGTAGACAAAGCAGAGATTCATCATACGGAAGGAACAACAACGACATCAATATTCAATCTTGCAACTTTTCCTGTTGCAATGGGTCTCTATGGTTACTGCTACGCAGGACATGCTGTGTTTCCAAACCTCTACATTGCCATGGCAAATCGGAATCAATTTCCTCGAGTGCTCTTAGTATGTTTTGTTATTTGTACAACTCTGTACTGTGCAGTAGCTGTTATGGGTTACTCAGCATTTGGAGAATCAACACTCTCTCAGTTCACTCTCAACATGCCCCAACACTTGGTAGCTGCAAAGATAGCTGTGTGGACAACGAACATTCCTAGAGTAGACACTTTATGTCTTGTTCTTTCTCTAGCTTTCTCTTCTTTGGAGGAGTTGATACCACCAACCAATCCCAACTTCAACATATATTCCAAGCTCATTAGAACAGCTCTAGTAGCTTCTACACTTCTTGTTGGTCTTTCAGTTCCCTTTTTTGGTTTGGTTATGTCATTGACTGGATCTTTACTCACAATGTTTGTTTCCTTGATTCTTCCTGCTGCTTGTTTCCTAAGCATAAGGGGTGGCAGAATGTCACACTTTCAGGTAGCACTTTGTGTTACAATTATAACAGTAGGGGTTGTATCAAGCTGTTTCGGATCTTACTCATCCCTCTCCGAGATCATTGAGCAATTGTTGGGATGA 1608 0.4204 MKNSGSESCMLFAESDEDMEKDLHRDENDGNGSDYSNDSNENQSMRKPSSYSIAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFLSSSLTRKQTLEIVQPEKKPLLQTSDEEQLRKSIIRKDASKVSHEAHIPGQCSFGQAVLNGINALCGIGILSTPYAVKEGGWIGLSVLLFYAVFSYYTGLLLRYCLDSAPGLETYPDIGQAAFGTTGRVLISACCIEYIIVESDNLSTLFPNAYINLGEIEVNAHVLFAILTSVALLPTVWLRDLRILSYISERIVVAVACGVIATVVVVICLFWVCLVDKAEIHHTEGTTTTSIFNLATFPVAMGLYGYCYAGHAVFPNLYIAMANRNQFPRVLLVCFVICTTLYCAVAVMGYSAFGESTLSQFTLNMPQHLVAAKIAVWTTNIPRVDTLCLVLSLAFSSLEELIPPTNPNFNIYSKLIRTALVASTLLVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRGGRMSHFQVALCVTIITVGVVSSCFGSYSSLSEIIEQLLG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00433 535 PANTHER OS05G0424000 PROTEIN-RELATED 149 513 - -
Spst7g00433 535 MobiDBLite consensus disorder prediction 33 49 - -
Spst7g00433 535 Pfam Transmembrane amino acid transporter protein 141 524 IPR013057 -
Spst7g00433 535 MobiDBLite consensus disorder prediction 1 49 - -
Spst7g00433 535 MobiDBLite consensus disorder prediction 14 32 - -
Spst7g00433 535 FunFam Amino acid transporter AVT1A 139 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00433 Spst-Chr7 3441819 3453796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00433 1 468 Amino Acid or Auxin Permease AAAP Family AT2G39130 56.048 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00433 K15015 - gmx:100798108 819.305