Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00431 ATGTCAGAACATGTCTTTGTTGAAGGTGTTGAGAGTAGAAAGCTGAAACGGAAGATTGAGGATGCATCTTCCAATGATGTTGTTGTTGATTCGAAGTTGTTACTATCTCTCAAAATGAGTGATGAATCCTCATCTAAAAGCCCTAAGAATTCACCAAGTTTTGTTGTTCCAAAACTTGAGGAAAACACTAATAATCAACTGAGTATCCCTACACAACGCCAATTTTCATGCAAGTTTTGTGACAAGAAGTTCCCAACCCCTCAAGCTCTTGGAGGACACCAAAATGCTCACAGGCATGAAAGAGTGGTTTTAAGGATGGATAAAGAATTTGGCAAGGGAAACTTTGGGCATGGCCTTCTCATGTTTCCATACTCAACCCTAACACAACAACACCATTATCATCATCATCCCTTCCATGGTCCAATGCCCCTTTATCATCACACTACCATTGCCCCATTGGCTCACATGGCCACCATGGCATCATGGCCTCACTTTGCACCAAGATATGAGAATAAGGCGTTCAACAACACATCCATCATAGGGCAACCATTTGGGGTGGCCAACCCTTGGGGTGTGGCTGCTGAAACGGCACAAAATATTTATCACAGATATGTGAGATTTGCTTCTGAACAGAACCATCAATCTTCATCCTCAAGAGCAGATTTATCCCTCAAACTATAA 681 0.4214 MSEHVFVEGVESRKLKRKIEDASSNDVVVDSKLLLSLKMSDESSSKSPKNSPSFVVPKLEENTNNQLSIPTQRQFSCKFCDKKFPTPQALGGHQNAHRHERVVLRMDKEFGKGNFGHGLLMFPYSTLTQQHHYHHHPFHGPMPLYHHTTIAPLAHMATMASWPHFAPRYENKAFNNTSIIGQPFGVANPWGVAAETAQNIYHRYVRFASEQNHQSSSSRADLSLKL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00431 226 ProSitePatterns Zinc finger C2H2 type domain signature. 77 99 IPR013087 -
Spst7g00431 226 Gene3D Classic Zinc Finger 61 115 - -
Spst7g00431 226 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Spst7g00431 226 SUPERFAMILY beta-beta-alpha zinc fingers 66 110 IPR036236 -
Spst7g00431 226 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 17 178 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00431 Spst-Chr7 3426406 3427086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00431 73 147 C2H2 Transcription Factor Family AT1G24625 42.683 2.23e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst7g00431 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00431 - - gmx:102669436 199.519