Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00420 ATGAGAGAGGAGGACTCAAATTGGTTCTCAAGTTGGGAAGAGGAGTTACCTTCTCCAGAGGAACTCATGCCTTTATCCCAAACCCTAATAAGTCCTCACCTTGCCATAGCCTTTGATATAACAAACCCTTCTCACCACCAACAATATTCTTCACAGCAAGTTCAAGAGCAACAATTTTCACATCAACCACCGTCCGGCACGGAGGAGGAACCAGCGAGGACCCAGAAGCGGCCGCGACTGGTGTGGACCCCACAGCTCCACAAACGCTTCGTGGACGCCGTGGCCCACTTGGGGATCAAGAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGCTTGACCCGCGAAAACGTCGCCAGCCACCTCCAGAAATACCGCCTCTACTTGAAGCGCATGCAGGGATTGGCCGGAGGCGCCGCCGCCGACTCCGCCACCGACCATATCTTCGCCAGCTCCCCCGTGCCGCCGCACTTTCTACACCCTGCCGGGCGCCCGACCTCTGACCATTACCTGCCCTTTGTACCGGCGTTGCAGCAGCACCGCCACCCCCACCAGCACATGGCGGTGGCCGGCGGCCACCGCCATTTCGGCTCGCCGCGGAATGCGCACTTTGAGCTCCCCATTCTGTCGCGGATGGGGGCTCCGGTGACGGGTTATGCTGAGGACGTGGAATCAGGAGGGAGAAAGGTTCTTACTTTGTTTCCAGCTGGAGATGATTGA 729 0.583 MREEDSNWFSSWEEELPSPEELMPLSQTLISPHLAIAFDITNPSHHQQYSSQQVQEQQFSHQPPSGTEEEPARTQKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLAGGAAADSATDHIFASSPVPPHFLHPAGRPTSDHYLPFVPALQQHRHPHQHMAVAGGHRHFGSPRNAHFELPILSRMGAPVTGYAEDVESGGRKVLTLFPAGDD 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00420 242 Gene3D - 73 136 - -
Spst7g00420 242 SUPERFAMILY Homeodomain-like 74 134 IPR009057 -
Spst7g00420 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 133 IPR017930 -
Spst7g00420 242 MobiDBLite consensus disorder prediction 45 79 - -
Spst7g00420 242 FunFam Two-component response regulator 73 136 - -
Spst7g00420 242 NCBIfam myb-like DNA-binding domain, SHAQKYF class 78 130 IPR006447 GO:0003677
Spst7g00420 242 Pfam Myb-like DNA-binding domain 81 129 IPR001005 -
Spst7g00420 242 MobiDBLite consensus disorder prediction 45 69 - -
Spst7g00420 242 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 194 IPR044841 GO:0003700|GO:0006355
Spst7g00420 242 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00420 Spst-Chr7 3301848 3302576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00420 1 242 G2-like Transcription Factor Family AT5G05090 57.303 3.05e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst7g00420 Myb_DNA-binding 1.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00420 - - vra:106771029 381.719