Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00375 ATGTCCCTCGAAGACTCTCTAAGATCTCTCTCTCTTGACTACCTCAACCTTCTCATCAACGGCCAAGCCTTCAGCGACGTCACTTTCCAAGTCGAGGGCCGCCTCGTCCACGCCCACCGCTGCATCTTGGCCGCGCGCAGCCTCTTCTTCCGCAAATTCTTCTGCGGCCCCGACCCCCCGCCCGCCCTCGACCCCTCTGCCTCGTCCAGAGCCGCCGCCGCTTCGGCCGCGCGCCCCCCCGGCGTCATCCCTGTCAACTCCGTCGGCTACGAGGTCTTCTTGCTGCTGCTGCAGTTCCTCTACAGTGGACAAGTCTCCATCGTGCCGCAGAAGCACGAGGCCAGGCCCAATTGCGGCGAGCGAGGGTGCTGGCACACGCATTGCACCTCCGCCGTTGATCTCGCCCTCGACACCCTCGCTGCCGCCAGATACTTCGGCGTCGAACAACTCGCATTGCTCACTCAGAAACAACTAGCGAGCATGGTGGAGAAAGCCTCAATCGACGATGTGATGAAAGTGCTGATAGCATCTCGAAAGCAGGAAATGCAGCAGCTTTGGAGCACGTGCTCCCACCTGGTGGCCAAGTCAGGTCTTCCGCCGGAGGTGCTGGCGAAGCACCTCCCCATTGACGTGGTGGCCAAGATCGAGGAGCTCCGGCTAAAATCCTCCATCGCGCGCCGCTCCATGCTGCCGCTGCAGCACCCGCACCACCACCCGGACCTGGCCAGCGCGGACATGGAGGACCAGAAAATCCGGAGGATGCGACGCGCGCTAGACTCCTCCGACGTGGAGCTTGTGAAGCTCATGGTGATGGGGGAGGGCCTGAACCTGGACGAGGCGCTGGCGTTGCACTACGCTGTGGAGAGTTGCAGCAGGGAGGTGGTGAAGGCGTTGCTGGAGCTGGGTGCGGCGGATGTAAACTTCCAGGCCGGTCCGGCCGGGAAAACGCCTCTGCACGTGGCGGCGGAGATGGTGTCTCCGGAGATGGTGGCGGTGCTGCTGGACCACCACGCTGACCCGAACGTGCGAACGGTGGAGGGCGTGACCCCGTTGGACATCCTGAGAACCCTAACCTCGGACTTCCTCTTCAAAGGGGCAGTCCCTGGACTCACCCACATTGAGCCCAACAAGCTCAGGCTTTGCTTGGAGCTCGTGCAATCCGCGGCTCTCGTTTTGTCTCGTGAAGAAGGGAACAACAATGCTAACAACAATGACAACACTAAAAACAGCAACACTTCTGCTTCTGCAACTGCTATCTTTCCACCAATGAATGAAGAGCACAGCAGTAGCAATTTGAACACCAGATTGGTTTATCTCAACCTCGGCGCCCCGCCACAAATGGGTGACGATGAAGGCAGCCAGAGAGAAGCCATGAACCGTCATGGCTCGCAAGGTGGTGGATGTGACCCATCAATGTACCATCACTCTCATGACTTCTAG 1440 0.5979 MSLEDSLRSLSLDYLNLLINGQAFSDVTFQVEGRLVHAHRCILAARSLFFRKFFCGPDPPPALDPSASSRAAAASAARPPGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEARPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIDDVMKVLIASRKQEMQQLWSTCSHLVAKSGLPPEVLAKHLPIDVVAKIEELRLKSSIARRSMLPLQHPHHHPDLASADMEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVESCSREVVKALLELGAADVNFQAGPAGKTPLHVAAEMVSPEMVAVLLDHHADPNVRTVEGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNNNANNNDNTKNSNTSASATAIFPPMNEEHSSSNLNTRLVYLNLGAPPQMGDDEGSQREAMNRHGSQGGGCDPSMYHHSHDF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00375 479 Pfam Domain of unknown function (DUF3420) 197 255 IPR024228 -
Spst7g00375 479 ProSiteProfiles Ankyrin repeat region circular profile. 313 343 - -
Spst7g00375 479 SUPERFAMILY Ankyrin repeat 272 356 IPR036770 -
Spst7g00375 479 ProSiteProfiles BTB domain profile. 25 109 IPR000210 GO:0005515
Spst7g00375 479 SMART ANK_2a 278 308 IPR002110 GO:0005515
Spst7g00375 479 SMART ANK_2a 313 342 IPR002110 GO:0005515
Spst7g00375 479 Pfam BTB/POZ domain 16 111 IPR000210 GO:0005515
Spst7g00375 479 MobiDBLite consensus disorder prediction 396 415 - -
Spst7g00375 479 Gene3D - 245 361 IPR036770 -
Spst7g00375 479 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 479 IPR044284 GO:0099402
Spst7g00375 479 Gene3D Potassium Channel Kv1.1; Chain A 4 195 IPR011333 -
Spst7g00375 479 SUPERFAMILY POZ domain 8 160 IPR011333 -
Spst7g00375 479 Pfam Ankyrin repeats (3 copies) 261 343 IPR002110 GO:0005515
Spst7g00375 479 CDD BTB_POZ_NPR_plant 8 162 - -
Spst7g00375 479 SMART BTB_4 25 162 IPR000210 GO:0005515
Spst7g00375 479 FunFam regulatory protein NPR5 isoform X1 4 195 - -
Spst7g00375 479 ProSiteProfiles Ankyrin repeat profile. 313 345 IPR002110 GO:0005515
Spst7g00375 479 FunFam regulatory protein NPR5 isoform X2 244 361 - -
Spst7g00375 479 MobiDBLite consensus disorder prediction 441 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00375 Spst-Chr7 2942745 2945922 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst7g00375 BTB 4e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00375 K14508 - gmx:100811388 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00375 7 2942745 2945922 Spst7g00375 7 2942745 2945922 ECH
Spst1g03476 1 43655766 43658258 Spst7g00375 7 2942745 2945922 PCT