Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00358 ATGGAGTTGAATGGAGTTTGCCTTTTGAGTAACCACAAGTCATCCAAGGAGGCTACATTGCCTCTGCCTTGGAGGAAGAGCTGGTTTGGATGGGTGAAAAGGCTATTCACTTCTGAGTCAAAGGACAACAAAGTAAGGGTACTCATTTTGGTTAACGTTTCCCTTGTGTACTCTCAGAAATGGGGGTGGAGTTTTGGAAGGATTAAGCAGAAACAGTATCCTACAATTACAGCTCCAAATAGGACATTGATTGAAGCAAGTGCAGAACAGAGAAAGCATGCTTTAACTGTGGCTATTGCAACTGCAGCAGCTGCTGAAGCTGCAGTTGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAACTCACAGGTGCCTCTCGTTCTTACTCATATCTTTCCAAGGGAGACAGAAGTTTAGCTGCCATCAAGATCCAAAGTGCATATCGTGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTGCAAGCCATAATTCGTGGTCAGGCTGCAAGACGTCAAGTGTCAAACACTTTACAGAATTTTCCCTCCAATGCAAGAAATCAGGTGGAAATTCTGGAAAGAAGCAGCCATACTGCTGAACATATGCAGCAAAGTCCAAAGCAAAAGAAAAAGTTAGAAGAGAAGGAACTGAAGTGTGAAGGCTATAGTCAAAGAACATGGGATTGTAGCTTGCTATCAAGAGAAGACATTGAAGCGATATGGCTTAGAAAACATGAGGCAACGGTCAAAAGAGAGCGCATGAAACAGTACTCTTCTTCACAAAGGGAAAGAAAAAATCCCCAAATGGTGGAAGAATCTGTGCACAGCATGAACTTTGGAAGAGAGGGCTGTCGAACACTGGGAGAGTGGCTGCACAAAGAAACATGTGATTGGAATGTGATCCATAAGCCAACTCTTCCTTCAAACTTGATGACAACAAAACAAGAATTGCAAGAAGGATTGAGTCCAAAAATTTCAATCCCAAGGAAATCATTTTCTCTTGTAAAAAGAAGTTTAAATGGGGATGAGAGTTTCATGTCAAATTCTCCAGTTTTTCCTACATACATGGCTGTTACTGAATCAAGCAAAGCAAAGATGAGGTCTATTAGCACACCAAAGCAAAGAACAGGAATCTTGGATATATGCTCCAATCAGAATGAACCTCAAAATGAAGGAATCTCCTTTTACTCTTCTTATTATGGTTCAACTAGTAGTACCAATGAAAACAATGCAAGTTACCAACAAAGATGCTAG 1266 0.4139 MELNGVCLLSNHKSSKEATLPLPWRKSWFGWVKRLFTSESKDNKVRVLILVNVSLVYSQKWGWSFGRIKQKQYPTITAPNRTLIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGASRSYSYLSKGDRSLAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGQAARRQVSNTLQNFPSNARNQVEILERSSHTAEHMQQSPKQKKKLEEKELKCEGYSQRTWDCSLLSREDIEAIWLRKHEATVKRERMKQYSSSQRERKNPQMVEESVHSMNFGREGCRTLGEWLHKETCDWNVIHKPTLPSNLMTTKQELQEGLSPKISIPRKSFSLVKRSLNGDESFMSNSPVFPTYMAVTESSKAKMRSISTPKQRTGILDICSNQNEPQNEGISFYSSYYGSTSSTNENNASYQQRC 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00358 421 Pfam IQ calmodulin-binding motif 139 157 IPR000048 GO:0005515
Spst7g00358 421 PANTHER IQ-DOMAIN 5-RELATED 31 400 - -
Spst7g00358 421 ProSiteProfiles IQ motif profile. 136 164 IPR000048 GO:0005515
Spst7g00358 421 ProSiteProfiles IQ motif profile. 160 187 IPR000048 GO:0005515
Spst7g00358 421 Pfam Protein of unknown function (DUF4005) 342 387 IPR025064 -
Spst7g00358 421 Gene3D - 130 184 - -
Spst7g00358 421 SMART iq_5 135 157 IPR000048 GO:0005515
Spst7g00358 421 SMART iq_5 158 179 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00358 Spst-Chr7 2806706 2809896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00358 25 421 IQD Protein Family AT5G03960 41.943 5.16e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00358 - - gmx:100800767 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00358 7 2806706 2809896 Spst7g00358 7 2806706 2809896 ECH