Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00330 ATGAGCAAAGCGCAAACAGATCTTGACTCAAGACTTGTTCCAAACCAAGAAGTGGAGAAGCCTTCGCAGACTTGTTCAAAGTCAACAAGGATAGCATCAGTCAAGACCATCTCACAATTGGCAAAGGAACAAAGCAATAATCACAACAAAGAAGACATGAAGAATCATGATCCGTTTCAAACTCTCTTCTTCCTATCCACACTTGTACTGCTTTTTATCTCCTCTGCAAAGGGAAAGTGTCCACCATCCTTCGTTTGTGGGAACTTAGGGACCATACGGTTCCCTTACACTGACACGAAACACCCTCAGTGTGGCTTGCTGGTGGTACATGGTTGTGAGGACCGTGACCCAGATGCGGTTAAAACAATTAAGAACAAAGGACAGTGGTTTTACATCACAAGTGAGGAAAACACAACCAACCTTTTGTTCAGAGATGATGACCTTCGCACCTACTTGCTGACAAGAAGATGTGGGGTGTTCACGAAAAACTACACCAAATTGGACACCACTTCCCCTTTCCTTTCACTTGACTTCACGACTGTTACTCTATTCACATGCAACAGCACCCTCAATGTCACCCCTCCTTCTTCAGCATTTTATAAATCTACAATATGCCCGAATGAGGACATCTTCTATGGCATAGTTGTTGATAAGTCCCTCAGTTACGGTTCCAGCGAGTTTGATTATTCTTATTTTGAACCGTGTTCAATGGTTAGACTTCCAATAAGAGATGCAGGACTTGTACCTAACGAAAATGGAAGCCTCTTTGACTATGTATCAGCTGATATTCCTGTCAAAACGGAGGTGTCTCCTGATTGTTCTTCTTGTTACCATCTTAGAGGAGGCCAGTGTCAACTTGACAGCCAAGGGAAGTTCTTGTGTGTACAAGGTACCTTGTTTATAGATGGAAAAAAGAAAACTAGTAGAAAGATGAAGATAGTGGTAGCAGCTACATCAGCTGCTGGAGCACTGGGAATTTTGATGGTTTTGGCATGCATCTTAAGAAGATACTATTTTCAAAATAAGAATCCCACTTACTTGATGATTGAGAACTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGCTACTTGGAGGTAAAGAAAATGACCAACTCCTTCAAAAAGAAATTAGGCCAAGGAGGGTTTGGTAGTGTATACAAAGGGAGGTTACAAAATGGAAGTCGTGTGGCAGTGAAGGTTTTGAGTAAGTCAAAAGGTGATGGAGAAGAATTCATCAACGAAGTTGCTAGTATTAGCATGACTTCTCATGTTAACATTGTCAGTTTACTGGGATTTTGCTTGGAAGGGTCCAAAAGATTTCTCATATATGAGTACATGCCCAATGGATCCCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTTAAGGCTTAAACTCACATTGAAGTGCAGAACAATGTACAATATTGCCATTGGTGTTGCTCGAGGACTGGAGTATTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGACATAAAACCTCACAACATACTGCTAGATGAGTTGTTTTGCCCCAAAATATCAGATTTTGGACTTGCTAAAATATGTCCTAGAGAACAAAGTATTGTATCAATGATGGTGGCAAGGGGAACCATAGGATACATTGCTCCTGAATTGTTCTGCAGAAACTTTGGTGGAGTGTCAAATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTGGAAATGCTTGGTGCTAGAGAGAATAACAATGGCAGAGTGGATTTTTCAAGTGAAAAATACTTTCCAGATTGGATTTACAACCACCTTGACTTAAATCAAGATCTCAAATTTCGATGTACCAAAAATCAAAGTGATGAAGAAATGGTGAGAAAAATGACAATTGTAAGTTTGTGGTGCATACAAACGGACCCTTCAAATCGACCCCCAATGAGTAAAGTGGTGGAAATGATGGAAGGAAGCATTAGCTCGCTGCAAATTCCCCCAAAACCTTTCCTTTCTTAG 1998 0.4044 MSKAQTDLDSRLVPNQEVEKPSQTCSKSTRIASVKTISQLAKEQSNNHNKEDMKNHDPFQTLFFLSTLVLLFISSAKGKCPPSFVCGNLGTIRFPYTDTKHPQCGLLVVHGCEDRDPDAVKTIKNKGQWFYITSEENTTNLLFRDDDLRTYLLTRRCGVFTKNYTKLDTTSPFLSLDFTTVTLFTCNSTLNVTPPSSAFYKSTICPNEDIFYGIVVDKSLSYGSSEFDYSYFEPCSMVRLPIRDAGLVPNENGSLFDYVSADIPVKTEVSPDCSSCYHLRGGQCQLDSQGKFLCVQGTLFIDGKKKTSRKMKIVVAATSAAGALGILMVLACILRRYYFQNKNPTYLMIENFLKQHGHLSAKRYSYLEVKKMTNSFKKKLGQGGFGSVYKGRLQNGSRVAVKVLSKSKGDGEEFINEVASISMTSHVNIVSLLGFCLEGSKRFLIYEYMPNGSLEKFIYEEKDPLRLKLTLKCRTMYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDELFCPKISDFGLAKICPREQSIVSMMVARGTIGYIAPELFCRNFGGVSNKSDVYSYGMMVLEMLGARENNNGRVDFSSEKYFPDWIYNHLDLNQDLKFRCTKNQSDEEMVRKMTIVSLWCIQTDPSNRPPMSKVVEMMEGSISSLQIPPKPFLS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00330 665 FunFam serine/threonine-protein kinase PBS1-like 348 448 - -
Spst7g00330 665 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Spst7g00330 665 ProSiteProfiles Protein kinase domain profile. 374 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00330 665 MobiDBLite consensus disorder prediction 1 28 - -
Spst7g00330 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Spst7g00330 665 SUPERFAMILY Protein kinase-like (PK-like) 357 649 IPR011009 -
Spst7g00330 665 Gene3D Phosphorylase Kinase; domain 1 350 448 - -
Spst7g00330 665 FunFam PR5-like receptor kinase 449 661 - -
Spst7g00330 665 PANTHER RUST RESISTANCE KINASE LR10-RELATED 348 662 IPR045874 GO:0004672
Spst7g00330 665 Gene3D Transferase(Phosphotransferase) domain 1 449 657 - -
Spst7g00330 665 SMART serkin_6 374 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00330 665 Pfam Protein kinase domain 377 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00330 Spst-Chr7 2582836 2587471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00330 62 662 Receptor kinase-like Gene Family AT5G38260 39.409 1.02e-131 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst7g00330 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00330 - - gmx:100807312 981.474