Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00323 ATGGGGAACAGTTGCGTCGTGCCCTTGGGGAAACACAGAAAGGAGAGGAGACAGAGGAAGCGGAATCCGTACGGGGATGGCGCGGGGAAGAAGCTGGTGGTGCTGAAGGAGCCCACGGGCCGGGACATTGGGCTGCGCTATGAATTGGGCCGGGAGCTGGGCCGGGGAGAGTTCGGCGTGACGTACCTCTGCTGCGACAGGGAGACGAAGGAGGAGTGGGCGTGCAAATCGATATCCAAGAAGAAGCTGCGAACCGCGATTGATATCGAGGATGTACGGAGGGAGGTGGAGATCATGCGCCACTTGCCTAAACATCCCAACGTCGTGTCGCTCAAGGACACCTTCGAAGACGACGATGCCGTTCACCTCGTTATGGAGCTCTGCGAGGGCGGCGAGCTATTCGACCGCATCGTCGCGCGCGGCCATTACACCGAGCGCGCCGCAGCTTCCGTCACCAAAACCATCGTCGAAATCGTTCAGATGTGCCACAAACATGGTGTCATGCATCGAGATCTCAAACCTGAGAACTTTTTGTTCGGAAACAAGAAGGAGACAGCACCTCTTAAAGCTATTGACTTTGGATTGTCGGTTATCTTCAAACCAGGTGAAAAATTTAATGAGATAGTTGGAAGTCCATACTACATGGCTCCTGAAGTATTAAAGCGTAATTATGGCCCTGAAATAGATATTTGGAGTGCTGGAGTAATTCTTTACATCTTACTTTGTGGTGTCCCTCCATTTTGGGCAGAAACTGAACAGGGAGTTGCTCAGGCAATTATTCGTTCTGTTGTTGATTTTAGAAGGGAACCATGGCCTAAGGTTTCTGACAATGCAAAAGACCTTGTGAAGAAGATGCTTGATCCTGACCCAAAGCGCCGGCTTACTGCACAAGAAGTGTTAGATCACCCATGGTTACAGAATGAAAAGAAAGCTCCTAATGTTTCATTGGGAGAAACTGTTAGATCAAGGCTCATGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTGATTGCAGATCATTTGTCTTCAGAAGAAGTTGCTGGAATAAAAGAGGGGTTTGACCTGATGGATACAGGCAATAACGGCAAGATTAACATGGATGAGCTGCGAGTAGGGTTGCAAAAACTAGGTCACCAAATTCCTGATGGAGATGTCCAAATACTCATGGAAGCTGGTGATGTAGACAAAGATGGGTGCCTAGATTATGGAGAGTTTGTTGCCATTTCTATTCATCTGAGAAAGATAGACCATGATGAGCACCTTCACAGAGCCTTCCAATTTTTTGATAAGAATCAAAGTGGATATATTGAAATCGAGGAGTTACTCAATGCCTTAGCTGATGAGATTGAAACAAACGGTGACGAAGTCATAAAATCAATTATGCATGATGTGGACACAGATAAGGATGGAAGAATAAGTTATGAGGAATTTGCTGCAATGATGAAGGCTGGCACAGATTGGAGGAAAGCATCAAGGCAGTATTCAAGAGAGAGGTTTTCCAGTCTAAGTCAGAAATTGATTCAGGACGGTGCTCTCTCCGTGCTTCCAGAGAAGGTGTGTTCCTCTCTGCATTGTTACACACTCATTCTGATTCAACGTCTTGCTTTTGTTCCTCCTCTGCGTCAAGCTTCCTCACTTTCCATTCCAATCCTCTTCTTCAGTGATAGAAACTTGGTGGTTCATGACAAGATCATACTGAGTGGAGTGCCAGACAACATTGTGCTAACTCCAGGAACGGGAAACGGCCTTGTAACAGGTGCATTTATTGGTGCCTCTGCTTTCAACAGCAAAAGCCTGCATGTCTTTCCCATGGGTGTCTTAGAAGTGGGAACCTGCGGGAGGGATGTCCCATTGGAGACTCAATTCATGCTTATAGAGAGCAAAGAGAGTAAAGATTATCAAGAGAATTCTCCAACAGTTTACATTGTTCTGCTTCCTCTCCTGGAAGGCCAGTTCCGTGCTGTTCTACAAGGCAATGACAAAAACGAGATAGAGATTTGCCTTGAGAGTGGTGAGTTGCTTCTTGGCCATGAAAGAGATCCTGCCGTTCAGACCAATCACGGCCTTCATTTGGTCTACATGCATGCTGGTACCAACCCCTTTGAAGTCATCAACCAAGCTGTCAAGGCTGTAGAAAAACACATGCAAACTTTCCGTCATCGGGAGAAGAAAAGATTGCCATCTTTTCTTGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTGTTGAGGAAGGCCTGAAAAGCCTATCAGGGGGAGGTACATGTCCAAGGTTCCTCATCATTGATGATGGTTGGCAACAGATTGAAAATAAAACAAAAGATGCTGATGATTGTGTTGTACAAGAAGGATCACAGTTTGCTACTAGGTTGACTGGCATTAAAGAAAATACTAAATTTCAGAAGAATCGACAGAGCAATGACACAATCTCAGGTCTGAAGCATGTTGTAGATGAAGCAAAGCGGCGTCACAATGTGAAATATGTTTATGTTTGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCTGCAGCCAGTGGCATGGAACATTATGACACATCCTTGGCATATCCAGTGCAGTCTCCAGGTGTGCTAGGAAACCAACCAGACATTGTCATGGACAGCTTGTCTGTACACGGCTTGGGACTGGTGCACCCGAAGAAGGTTTTTGATTTCTACAATGAGCTTCATGCTTACTTAGCTTCATGTGGAGTAGATGGAGTGAAAGTTGATGTGCAAAACATTATTGAGACCCTAGGTAGTGGACACGGGGGTAGGGTCACACTCACGCGTAGCTATCATCAGGCACTTGAGGCCTCAGTTGCTCAGAATTTTCCTGACAATGGATGCATTGCCTGTATGTGTCATAACACTGATGGCCTTTATAGTTCCAAGCAGACTGCTGTTGTGAGAGCATCTGATGACTTTTACCCTCATGATCCTGCTTCCCACACAATTCACATTTCATCTGTTGCATATAACACGCTTTTCCTGGGAGAATTCATGCAACCTGACTGA 3054 0.4604 MGNSCVVPLGKHRKERRQRKRNPYGDGAGKKLVVLKEPTGRDIGLRYELGRELGRGEFGVTYLCCDRETKEEWACKSISKKKLRTAIDIEDVRREVEIMRHLPKHPNVVSLKDTFEDDDAVHLVMELCEGGELFDRIVARGHYTERAAASVTKTIVEIVQMCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVIFKPGEKFNEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFRREPWPKVSDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNEKKAPNVSLGETVRSRLMQFSVMNKLKKRALRVIADHLSSEEVAGIKEGFDLMDTGNNGKINMDELRVGLQKLGHQIPDGDVQILMEAGDVDKDGCLDYGEFVAISIHLRKIDHDEHLHRAFQFFDKNQSGYIEIEELLNALADEIETNGDEVIKSIMHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFSSLSQKLIQDGALSVLPEKVCSSLHCYTLILIQRLAFVPPLRQASSLSIPILFFSDRNLVVHDKIILSGVPDNIVLTPGTGNGLVTGAFIGASAFNSKSLHVFPMGVLEVGTCGRDVPLETQFMLIESKESKDYQENSPTVYIVLLPLLEGQFRAVLQGNDKNEIEICLESGELLLGHERDPAVQTNHGLHLVYMHAGTNPFEVINQAVKAVEKHMQTFRHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSGGGTCPRFLIIDDGWQQIENKTKDADDCVVQEGSQFATRLTGIKENTKFQKNRQSNDTISGLKHVVDEAKRRHNVKYVYVWHALAGYWGGVKPAASGMEHYDTSLAYPVQSPGVLGNQPDIVMDSLSVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVTLTRSYHQALEASVAQNFPDNGCIACMCHNTDGLYSSKQTAVVRASDDFYPHDPASHTIHISSVAYNTLFLGEFMQPD 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00323 1017 FunFam Calcium-dependent protein kinase 1 49 132 - -
Spst7g00323 1017 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524
Spst7g00323 1017 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
Spst7g00323 1017 PANTHER - 557 1017 IPR008811 -
Spst7g00323 1017 Gene3D Transferase(Phosphotransferase) domain 1 133 313 - -
Spst7g00323 1017 Pfam Protein kinase domain 47 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00323 1017 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Spst7g00323 1017 Pfam EF-hand domain pair 423 486 IPR002048 GO:0005509
Spst7g00323 1017 SUPERFAMILY Protein kinase-like (PK-like) 46 306 IPR011009 -
Spst7g00323 1017 SMART serkin_6 47 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00323 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Spst7g00323 1017 CDD STKc_CAMK 46 304 - -
Spst7g00323 1017 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Spst7g00323 1017 Gene3D Phosphorylase Kinase; domain 1 49 132 - -
Spst7g00323 1017 SMART efh_1 460 488 IPR002048 GO:0005509
Spst7g00323 1017 SMART efh_1 424 452 IPR002048 GO:0005509
Spst7g00323 1017 SMART efh_1 388 416 IPR002048 GO:0005509
Spst7g00323 1017 SMART efh_1 352 380 IPR002048 GO:0005509
Spst7g00323 1017 SUPERFAMILY (Trans)glycosidases 733 1012 IPR017853 -
Spst7g00323 1017 ProSiteProfiles EF-hand calcium-binding domain profile. 348 383 IPR002048 GO:0005509
Spst7g00323 1017 MobiDBLite consensus disorder prediction 1 29 - -
Spst7g00323 1017 SUPERFAMILY EF-hand 329 498 IPR011992 -
Spst7g00323 1017 Gene3D Aldolase class I 735 1016 IPR013785 -
Spst7g00323 1017 Pfam Raffinose synthase or seed imbibition protein Sip1 558 1017 IPR008811 -
Spst7g00323 1017 CDD EFh 424 486 IPR002048 GO:0005509
Spst7g00323 1017 ProSiteProfiles Protein kinase domain profile. 47 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00323 1017 Pfam EF-hand domain pair 365 411 IPR002048 GO:0005509
Spst7g00323 1017 FunFam Calcium-dependent protein kinase 7 314 489 - -
Spst7g00323 1017 FunFam calcium-dependent protein kinase 13 133 313 - -
Spst7g00323 1017 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Spst7g00323 1017 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
Spst7g00323 1017 Gene3D - 314 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00323 Spst-Chr7 2509540 2520408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00323 1 518 EF-hand Containing Proteins AT5G19450 75.236 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst7g00323 Raffinose_syn 5.2e-190 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00323 K13412 - gmx:100778471 934.095