Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00322 ATGGAGAAGATGGCTGCACTTACTACTATTCACACCTCCCTCTTCCCCACCAACACCACTCTTCCAAAGACATCCGCTTTTCAACCCTTCTTCCATACCCAACTTCTTGGCCTACCCTTATCTTCTTCCTTTTCCGCCGCCAAAAGATTATCTTCCTCCACTTGCAGGCCCATTAAATGTTCCGTTTCAGAAGCCACAGAACCCAAAACTGAGAAGAAGAGGCAATTGCTAAGAAGAGCGGACGTGAGAAATATAGCAATTGTTGCTCATGTTGATCATGGAAAAACTACTCTCGTTGATGCCATGCTCAAACAAACTAAGGTATTTCGTGACAATCAATTTGTTCAGGAGAGGATAATGGACTCGAATGATTTGGAGCGCGAAAGAGGGATCACAATACTGAGTAAAAATACATCTGTCACCTATAAAGACACAAAGATCAATATAATAGACACTCCAGGTCACTCTGATTTTGGGGGTGAAGTGGAGCGTATCTTAAATATGGTGGAAGGGATCCTTCTAGTGGTAGATTCTGTTGAAGGACCAATGCCACAGACAAGATTCGTCTTGAAGAAGGCTTTAGAGTTTGGTCATTCAGTTGTCGTGGTTGTGAATAAGATAGATAGGCCTTCTGCTCGCCCAGATTTTGTTGTCAATTCTACTTTTGAACTCTTCATTGAACTAAATGCCACAGACGAACAGTGTGACTTTCAAGTGATATATGCAAGTGGTATAAAAGGGCAAGCAGGGTTGTCTCCAGAAAATCTGGCAGAAGACCTTGGTCCATTGTTTGAATCCATCATTAGATGCATTCCTGGACCACGCATTGACAAAGATGGTGCACTTCAAATGCTGGTGACGAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATCGGGCGCGTGCAAGCTGGAGTTTTAGCAAAAGGCATGGATGTTCGCGTATGTACTTCAGATGATTCATGTAGATTTGGAAGAGTTAGTGAGCTCTACGTGTATGACAAATTCAGTAGGGTTCCTGCTGATAATGTGGAGGCAGGTGATATATGTGCAGTGTGTGGAATTACTGACATTCAGATTGGGGAGACAATTGCTGATAAAGTATCTGGGAAGCCACTACCTTCTATCAAGGTCGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACTTCACCTTTTGTTGGCCGTGAGGGAAAGTATGTTACTAGTAGGAATTTAAGAGATAGGCTTTATCGTGAACTTGAGCGAAATCTGGCTATGAAAGTTGAAGATGGTGAAACAGCGGATACATTTGTTGTCAGTGGGCGTGGAACTTTGCATATCACTATACTCATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAGGTGAATGAACAACTGTTGGAACCATACGAGATTGCAACTGTGGAGGTGCCAGAAGAGCACATGGGAGCTGTAGTTGAACTTCTTGGCAAGAGACGAGGACAAATGTTTGATATGCAAGGAGTTGGATCGGAAGGAACTACACTACTCAAATATAAGATCCCGACCCGTGGCCTTCTTGGATTGCGGAATTCAATCTTAACTGCTTCTCGAGGAACGGCTATTCTGAACACCGTCTTCGACAGCTATGGGCCATGGGCTGGTGACATTAGTACTCGTGATCAAGGCTCATTGGTTGCTTTTGAGGATGGAGCAAGTACTTCTTATGCAATCTCTAGTTCACAGGAGAGGGGACAGATGTTTATTGGCCCTGGTGTGGAAGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCCTTGAATGTTTGTAAGAAGAAAGCTGCTACCAACATTCGTTCCAACAAGGAACAAACAGTGATTCTTGATACACCATTGGATTATAGTCTGGATGACTGCATTGAATACATCCAAGAAGATGAACTTGTAGAGGTCACCCCCGCAAGTATCCGAATGTGCAAGAATCCAAAAATAGCAAAGAAAACAAGGTAG 2025 0.4296 MEKMAALTTIHTSLFPTNTTLPKTSAFQPFFHTQLLGLPLSSSFSAAKRLSSSTCRPIKCSVSEATEPKTEKKRQLLRRADVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRVQAGVLAKGMDVRVCTSDDSCRFGRVSELYVYDKFSRVPADNVEAGDICAVCGITDIQIGETIADKVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFVVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNEQLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTVFDSYGPWAGDISTRDQGSLVAFEDGASTSYAISSSQERGQMFIGPGVEVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPASIRMCKNPKIAKKTR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00322 674 CDD BipA_TypA_C 475 554 IPR035651 -
Spst7g00322 674 FunFam GTP-binding protein TypA 466 559 - -
Spst7g00322 674 Gene3D - 466 559 - -
Spst7g00322 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 282 IPR027417 -
Spst7g00322 674 Gene3D - 80 275 IPR027417 -
Spst7g00322 674 Pfam Elongation factor G C-terminus 472 558 IPR000640 -
Spst7g00322 674 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 121 136 IPR031157 -
Spst7g00322 674 NCBIfam small GTP-binding protein domain 83 231 IPR005225 GO:0005525
Spst7g00322 674 PRINTS GTP-binding elongation factor signature 200 209 IPR000795 GO:0003924|GO:0005525
Spst7g00322 674 PRINTS GTP-binding elongation factor signature 148 158 IPR000795 GO:0003924|GO:0005525
Spst7g00322 674 PRINTS GTP-binding elongation factor signature 84 97 IPR000795 GO:0003924|GO:0005525
Spst7g00322 674 PRINTS GTP-binding elongation factor signature 128 136 IPR000795 GO:0003924|GO:0005525
Spst7g00322 674 SMART EFG_C_a 472 561 IPR000640 -
Spst7g00322 674 SUPERFAMILY EF-G C-terminal domain-like 380 464 IPR035647 -
Spst7g00322 674 FunFam GTP-binding protein TypA 276 376 - -
Spst7g00322 674 SUPERFAMILY Translation proteins 228 375 IPR009000 -
Spst7g00322 674 NCBIfam translational GTPase TypA/BipA 82 670 IPR006298 GO:0003924|GO:0005525
Spst7g00322 674 CDD TypA_BipA 81 274 IPR047041 -
Spst7g00322 674 FunFam GTP-binding protein TypA 79 275 - -
Spst7g00322 674 FunFam GTP-binding protein TypA 383 489 - -
Spst7g00322 674 Gene3D Elongation Factor G (Translational Gtpase), domain 3 383 666 - -
Spst7g00322 674 Gene3D Translation factors 276 376 - -
Spst7g00322 674 Pfam Elongation factor Tu GTP binding domain 81 272 IPR000795 GO:0003924|GO:0005525
Spst7g00322 674 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 78 250 - -
Spst7g00322 674 SUPERFAMILY EF-G C-terminal domain-like 475 590 IPR035647 -
Spst7g00322 674 CDD BipA_III 382 460 IPR047043 -
Spst7g00322 674 Gene3D bipa protein 560 639 IPR042116 -
Spst7g00322 674 FunFam GTP-binding protein TypA 560 646 - -
Spst7g00322 674 CDD BipA_TypA_II 282 375 IPR047042 -
Spst7g00322 674 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 80 275 IPR000795 GO:0003924|GO:0005525
Spst7g00322 674 Pfam Elongation factor Tu domain 2 296 365 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00322 Spst-Chr7 2499135 2506920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00322 82 209 Eukaryotic Initiation Factors Gene Family AT3G22980 44.615 5.54e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00322 K06207 - gmx:100785222 1257.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00322 7 2499135 2506920 Spst7g00322 7 2499135 2506920 ECH