Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00312 ATGGCCGAGTCACTTCTTTTCAGCTTTGCACAATCACTCATAGGGAAGCTTGCTTCTCGTGCCGTTGAAGAAGCTTCTTTGGCTCTCGGTGTGCACCGCGAGCTACAGCAGATGAAAGCAACTATGTCACTCATCAAAGCTGTGCTGTTAGATGCTGAGCAAAAGATGTCGCAGAGCAGTGCATTGAGCGAATGGCTGAGACTGATCAAGCACGTCTTCTCCGACGCCGAGGACATAGTCGACGATTTTGAGTGTGAAGCGTTGCGGAAGAACGTTGTCAACACAAATGGTAGCTGCTCAAGGAAGGTACGCCGTTTCTTCTCTTCAAGTAATCCTCTTGTTTATCGTCTTAGAATGGCGCATCAGATGGAAGATATCAAGGAGAGGTTGGACAAACTTGCAGCTCATAGGAACCTGTTTGGCCTTAAAGTCATTGACCGAGATAATCATGTGGTCCACGTGAGGGAAATGACTCATTCTCATGTAAACCCTTCCAATGTTATAGGAAGGGAACATGATACACAGAATATCATAAAACTTCTGCTGCAAGATGGTCATCAAGAAAAACTCTCTGTTATTCCCATTGTGGGAATGGGAGGTTTGGGAAAGACCACACTTGCAAAGTTGGTGTTCAATGACACTAGCATTGAAGAATGTTTTCCGTTGAAGATGTGGGTGTGTGTCTCTAATGATTTTGAACTTAGGAATGTGCTTGTTAAAATCCTTAATTCTGCTCCTAACCCAACTAAGGAAAACTTCAATAACTATGAGACGGAGCAACTTCAACATCATTTGAGAAATACTCTTCGTGGTCAAAAGTTCTTGCTTGTCTTGGATGATGTGTGGAACGAGGAGCGTGCTAGATGGGATGATTTGAAGGAAATAATAGATGTGGATGTTGAAGGGTGTAAAATTCTGGTGACTACTCGTAGCCACTCAATAGCTGACATGATGCGCACTAAATCCTCAAACTCTTACCTTCTAGAACGCCTCTCTGATGATGATTCTTTTTCTCTATTCGTCAAATCTGCTTTTGAAGATGGAGATGAGAAAAAACATCCACAACTATTGGAGATTGGGAAAGAAATAGTTAAAAAATGTGGAGGGTTACCGTTGGCTGTGAGAACGTTGGGGAGTTCACTGTTCTCAAGGGTTGATAAGAAAGAGTGGGAATTTATAAGAGACAATGAGATTTGGACTTTAAGACAAAATGAGCAAGGAATTCTGCCTGCTCTCAAATTAAGTTACGATCAACTGCCTTCATATTTAAAACCATGTTTTGCTTCTTTCTCCCTTTTTCCTGAGGACTCTATTATTTATGGCTATGGAGTTACTAGGCTGTGGGAAGCTCTTGGTTTTCTTCCACCACCACAGAAATATGAATCCATGGCTGATGTTGGCAAGCAATTTTTGCATGAGTTATGGTCAAGATCTTTTCTTTCAGATTATGTTGACGTTGGGACTGATTGCTATTTTAAATTGCATGATTTGGTAAGTGATCTTTCAGTGTATGTTGCGAAAGGTGAGTTTGAAAAAATAGATCCCCTCAATCAACAAGTATCTGAGTACACTCAACATTTGACATTAATAGAAAATAATATGGGTGGTCGAGCTCTTCTTCCCACAGGTCTGAGAACTCTGCACTGTCGTAACGGAACCAACAACGAAGCTTTCTTGAGCACATTGGTTGCAAAGTGCAAATACTTGAGGGTTTTAAACTTATGTTTTTCTGAATACGAGAGTTTGCCTCGCTGCATCGGAAAGTTGAAACATTTAAGATATCTCGGTCTTTCGGATAGTGAAAAACTTAAGGAACTCCCTGATTCGATCTGCAAACTTCAAAATTTGCAAACTTTGAACCTTCGCGGATGCATAAAGCTACAAAAATTACCCAAAGGAATAGGAAATCTAATCAGCCTTCGTCACCTAACTATAACCACCAGACAACCTGATTTTCCTGAGAAAGAGATTGCAAATTTGACTTTTTTAGAATCTTTACATTTTGTTAAATGTGATAACGTGGAGACATTGTTCACAGGGTTACAACTTCCCAATCTTAAAAATTTGTTTTTGATTGAATGTGGGAATCTGAAGTCGGTGTGGTTTCATGCCATTAGAAATGTAGAGGTTTTGAGGATCACAAAGTGTTGTAAGTTGGAATTGTGGATGGGCCTTAGCAGCCAAATCCCGGATTCAAGGTTAAAATTTCTTGTTCTTTTTGATTTAGAACAGTTGATCACTTTGCCTCAGTGGTTGGAAGGATCTGTGAACACCTTACATACCCTTTCCATATATGACTGTGAATTTGGAGGAGCTTCCTGA 2322 0.4044 MAESLLFSFAQSLIGKLASRAVEEASLALGVHRELQQMKATMSLIKAVLLDAEQKMSQSSALSEWLRLIKHVFSDAEDIVDDFECEALRKNVVNTNGSCSRKVRRFFSSSNPLVYRLRMAHQMEDIKERLDKLAAHRNLFGLKVIDRDNHVVHVREMTHSHVNPSNVIGREHDTQNIIKLLLQDGHQEKLSVIPIVGMGGLGKTTLAKLVFNDTSIEECFPLKMWVCVSNDFELRNVLVKILNSAPNPTKENFNNYETEQLQHHLRNTLRGQKFLLVLDDVWNEERARWDDLKEIIDVDVEGCKILVTTRSHSIADMMRTKSSNSYLLERLSDDDSFSLFVKSAFEDGDEKKHPQLLEIGKEIVKKCGGLPLAVRTLGSSLFSRVDKKEWEFIRDNEIWTLRQNEQGILPALKLSYDQLPSYLKPCFASFSLFPEDSIIYGYGVTRLWEALGFLPPPQKYESMADVGKQFLHELWSRSFLSDYVDVGTDCYFKLHDLVSDLSVYVAKGEFEKIDPLNQQVSEYTQHLTLIENNMGGRALLPTGLRTLHCRNGTNNEAFLSTLVAKCKYLRVLNLCFSEYESLPRCIGKLKHLRYLGLSDSEKLKELPDSICKLQNLQTLNLRGCIKLQKLPKGIGNLISLRHLTITTRQPDFPEKEIANLTFLESLHFVKCDNVETLFTGLQLPNLKNLFLIECGNLKSVWFHAIRNVEVLRITKCCKLELWMGLSSQIPDSRLKFLVLFDLEQLITLPQWLEGSVNTLHTLSIYDCEFGGAS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00312 773 Gene3D - 149 324 IPR027417 -
Spst7g00312 773 Gene3D - 330 420 IPR042197 -
Spst7g00312 773 FunFam Probable disease resistance protein At1g61300 149 323 - -
Spst7g00312 773 Pfam Rx N-terminal domain 10 98 IPR041118 -
Spst7g00312 773 PRINTS Disease resistance protein signature 192 207 - -
Spst7g00312 773 PRINTS Disease resistance protein signature 611 627 - -
Spst7g00312 773 PRINTS Disease resistance protein signature 367 381 - -
Spst7g00312 773 PRINTS Disease resistance protein signature 268 282 - -
Spst7g00312 773 Pfam NB-ARC domain 171 417 IPR002182 GO:0043531
Spst7g00312 773 CDD RX-CC_like 8 134 IPR038005 -
Spst7g00312 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 428 IPR027417 -
Spst7g00312 773 PANTHER DISEASE RESISTANCE PROTEIN RP 46 741 IPR044974 GO:0006952
Spst7g00312 773 Gene3D Ribonuclease Inhibitor 510 772 IPR032675 -
Spst7g00312 773 Gene3D - 10 123 - -
Spst7g00312 773 SUPERFAMILY L domain-like 493 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00312 Spst-Chr7 2444426 2446747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00312 190 455 WRKY Transcription Factor Family AT5G45050 27.106 4.80e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00312 - - vra:106771654 1069.68