Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00302 ATGGTCGGTGACGACGACCCTTCATCACTTGCATGGCTTTGGGTCATTGAAGCCCTATCAGCCTATAAAGAAATCTCTAATACCACTTTGCAGGGTTTCATTGATGCAGCACCTGTGGGGAATGATAAATTTAGTGAAAAGACAAAGGAAATGGTTTCTTTGAGGTGTTTGGAGCAAATGTCCACCAGTGTGGTTGACCCTGAAGCTCCTTCTACATCGGGTTCCAGATCTGAATTTGATTTTTCGCGGGGTTGCCAAGATGTCCTCCAGGAAATACTGAATGAGATTTATACTGGAAATAATGAAAACATGATTTTTGTTGTTTCCAGGCTTCAGATCCCATTATCAAATCTTAAAATGACTGGAGCAGAGCTTTTGAAATCGGATGTTTGCCCATTTATAAATCACAAAAGAGCTAGCACTTTTAAATGTCACTTAGAGCAGCTGAGAGAAGCAATCTTGGAAGGTACTCATCCACATACTGATTACTTGAAAGAAACGAGTGGATTATTTCCTCAGAATAATGGTTATTCAGTGCTTGTAAATGATGCCAAACGTGATGATCATTCATCTAAGAATGCTGGGACCTCCACTGATACAGAAAACATGGTACAAAAAGATAACTCAGTGTCCTTAACTTTAGAGAATTGGAATAAATCTTCAAAAGAACACGGGCTTGATAATAATTCTTCACCCTCAAAGAGGAGTAGGCTTTACTCAGCTGCTGATCATCTGACAAAACACCATGAAAAGCAAGTTTGTTTAAGTGAATGTGTTGATTTCTTTAGAACATCAAAGAAGGTTAAACTTTCTGCATCTACAAGTTTTGAGTCTAAGAAAGAGAAGCTAGATTCTGAACTCCGACAGGAAGTGTCAGAGCATTTAACTGAACGAATTCTTCTAGTTTCTGAACAAGGAGATCATCGTGCAGAAAATAGTAACAAGGAAACTCTGGTTGGTGGGTCCGCAGAGGATAGTCACAATAGATGCGCTGCTTCAAAATTGTGCCAACCCAGCAGCCATATTGAAGTCTCCCATGATGAATCAAATATGCCTTTTAATAATGTTTTGATGCCTCAACATACATTTGGAGGTGAACATTCTCAGCAACTGCAGGTTGAGTCAGCTCCTCATGTTGCACTTCCAGATGGAATCCAGCATGAGATTTCCAGAAGTAAACCTTGGTCTAATCATGAAAAAGATTTACAACTAAAAGATCCAAATGACTCACAGCTGCAAATTGCTGGTGCTCCAGATCATACTGGGTATGATTGTGGCGTAGAGAAATCAGGTAATATAGTGTATCAAGGTGAAAAGATTAACCTCGAAGTGAAAAAGCAGGCAGAGCAAAATCTTTGTTTGAAGTGTAATGAAGGTGATCAATTATGGATTTGTGATTTAAATGTTGTCAAACCAGTGGTTCCTGAATGTCGTCATGGTATGGCAAATACCATTATGCATCAGCATATCTCTGTTGCTGAACCTTGTAATAATACATCTATGGATGAATCTGATGATACTGCACATCATCCCATTCCAACAAATGATGCTAATGCAGAAAATATTCATCCAACAATTAATTTACACCAACCCAAACAGACAGAATCAGATATTGCAATTTTCAATCTCTATCTCTCCCGGAAGCCAGTTGCTTGTGCTAAAACTATAGTTGGTGGTGTTAATGGTTGTGGAGCAGAGTTATCGAATGATAGTGATGAATGTCACAATGAAAAAGAATATCTTGAAGCAAAAAAACATGAATTCCTGCACTCCCACTACAATCAAGATTTTTCAGCAATGAGCAAACCAAATAAACAAAATCTTTGCATGAAGTGTAATCAAGGTGGCCAATTACTGGCTTGTAAAACAACTACTTGCCAATTGATGGTGCACGAAAACTGTCTTGGTGCACCTGCACAATTGGATGGGAAAGGCAACTTTGTTTGCCCATTTTGTGCATATTCTCACACTATTTCAGAATACGTTGAAGCTAAGAAAAAAGCTTCCTTGGCAAGGAAAGAATTAGCTAACTTTATTACTAAAGGTAAAATGAGTCAAGCTGTTGAGAGTCTTCTTTGTGAATTTCATACAGAAGAACATTGTTTTTCACGAAAGAGTAGTAAGTTTGAACATATTTATGTTGAAAACAACGAAGATGATCAGTTAACAAGGTGCGAAGACAATAGAGAAGATCATGTTGGTGAGCATGCAAAGGAAGCCAACAATCTCCGGTTTGAAAGATGTCAGCAACAAGCCCCTATATCATGTATCCGTTCATCATGCAGAGAAAAGGAAACTGTAAGCGATGGATCAGTTGAAGTTTTAAGAGAAGAGGAAATAGGTGAAATGTCAACTGCAAAGCATTTAACTGGAGTTGAAGAAAATTATGTGCCAACTGGGCATGTAAATGGGCATGTTGGTGGTGACATATTTACTAGTGAAAAATCAAATATTGCCCTTGTTAATAAAAGCATTGCTGGAGATGAAAGTCCACAAGAAATGACAAAACAGCTAGATATTGATGGAGAAATAGAGCCAGTTTGTGCACATTATAGTGGAAAAGAGAAATTTTCTGAAAATGAATGTGACAAGCATAGTATTCCTAGATACTCCACGAGATACCGTAAACATGAAATGCAATCCAAATTCCCAGCAAGCCCAGTATCTCAGGGTAATCAGTTAAAACGAAAGAAAATTCCGTGGACAGCTGAGGAGGAAGAGATGATAAGGGAGGGAGTTCAGAAGTTTGGTAAGAAATGGAAAAACATTTTGGCATTCGGTTCTCATGTGTTTGACAAAGATAGTAAGCGTCGTACACCACAAGATCTGAAGGATAAATGGAAGAACATGTCATTTTTTTCTTCCCTCCAGAAACTCGGCAGATGA 2886 0.3839 MVGDDDPSSLAWLWVIEALSAYKEISNTTLQGFIDAAPVGNDKFSEKTKEMVSLRCLEQMSTSVVDPEAPSTSGSRSEFDFSRGCQDVLQEILNEIYTGNNENMIFVVSRLQIPLSNLKMTGAELLKSDVCPFINHKRASTFKCHLEQLREAILEGTHPHTDYLKETSGLFPQNNGYSVLVNDAKRDDHSSKNAGTSTDTENMVQKDNSVSLTLENWNKSSKEHGLDNNSSPSKRSRLYSAADHLTKHHEKQVCLSECVDFFRTSKKVKLSASTSFESKKEKLDSELRQEVSEHLTERILLVSEQGDHRAENSNKETLVGGSAEDSHNRCAASKLCQPSSHIEVSHDESNMPFNNVLMPQHTFGGEHSQQLQVESAPHVALPDGIQHEISRSKPWSNHEKDLQLKDPNDSQLQIAGAPDHTGYDCGVEKSGNIVYQGEKINLEVKKQAEQNLCLKCNEGDQLWICDLNVVKPVVPECRHGMANTIMHQHISVAEPCNNTSMDESDDTAHHPIPTNDANAENIHPTINLHQPKQTESDIAIFNLYLSRKPVACAKTIVGGVNGCGAELSNDSDECHNEKEYLEAKKHEFLHSHYNQDFSAMSKPNKQNLCMKCNQGGQLLACKTTTCQLMVHENCLGAPAQLDGKGNFVCPFCAYSHTISEYVEAKKKASLARKELANFITKGKMSQAVESLLCEFHTEEHCFSRKSSKFEHIYVENNEDDQLTRCEDNREDHVGEHAKEANNLRFERCQQQAPISCIRSSCREKETVSDGSVEVLREEEIGEMSTAKHLTGVEENYVPTGHVNGHVGGDIFTSEKSNIALVNKSIAGDESPQEMTKQLDIDGEIEPVCAHYSGKEKFSENECDKHSIPRYSTRYRKHEMQSKFPASPVSQGNQLKRKKIPWTAEEEEMIREGVQKFGKKWKNILAFGSHVFDKDSKRRTPQDLKDKWKNMSFFSSLQKLGR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00302 961 ProSiteProfiles Zinc finger PHD-type profile. 606 655 IPR019787 -
Spst7g00302 961 MobiDBLite consensus disorder prediction 183 207 - -
Spst7g00302 961 ProSiteProfiles Myb-like domain profile. 893 951 IPR001005 -
Spst7g00302 961 Gene3D - 891 952 - -
Spst7g00302 961 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 558 950 - -
Spst7g00302 961 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 895 955 IPR017930 -
Spst7g00302 961 SMART sant 897 953 IPR001005 -
Spst7g00302 961 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 600 662 IPR013083 -
Spst7g00302 961 MobiDBLite consensus disorder prediction 304 325 - -
Spst7g00302 961 MobiDBLite consensus disorder prediction 499 520 - -
Spst7g00302 961 SMART PHD_3 608 653 IPR001965 -
Spst7g00302 961 SUPERFAMILY FYVE/PHD zinc finger 602 656 IPR011011 -
Spst7g00302 961 Pfam Myb-like DNA-binding domain 901 949 - -
Spst7g00302 961 CDD SANT_TRF 899 950 - -
Spst7g00302 961 SUPERFAMILY Homeodomain-like 900 954 IPR009057 -
Spst7g00302 961 ProSitePatterns Zinc finger PHD-type signature. 609 652 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00302 Spst-Chr7 2344741 2350881 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00302 891 959 Single Myb Histone (SMH) Gene Family AT1G72740 43.836 2.79e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst7g00302 Myb_DNA-bind_6 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00302 - - ccaj:109810464 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00302 7 2344741 2350881 Spst7g00302 7 2344741 2350881 ECH