Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00294 ATGGCAGACCCTTACTCCAATTTCTTCTCACCACCTTTCTTCCACTACCCTTCTCCAAACCCTTCACCCCACCACCATCCATATGCCCACAACTTCATCAACCAAACCACCACCACCACCACCACCACCAACATCAACCAGGGAACCTTTTTCCACTTCCACCACCATCACCACTTTCAAACCACTGCCACTTCTTGTTCTTCTTCACCCCCTTCCCCTCCCTTGAGAGAGGCCCTTCCTCTTCTCACTCTCAGCCCAAAAAATGATGAGGAACAAGAGGAGGACTACCAGGATCAGGGTCAGGTTTGCACTGCCATGGATGTGGAAGAGGACTATAACAGGAACCTCCATAACCCCAAAGAGGAGGAGCATGAAGAGGATGGTGATGACAGTGTCACTGTTGCACTGCACATAGGCTTGCCAAGCCCTAGTGCTGCTGAGATAGCTTCCGTGCTGTCTTCTGCTTGTACCGCAGACAAAGGGCAACAACAAGGAGGAGGAGGAGATAGTAATAATAATGGGAGTGAGGATTCTTCTTCAGGGTTCTTGTCCAACAGGCTCAACAAGGGACAGTACTGGATCCCTACCCCTTCGCAGATTCTCATTGGTCCTACACAGTTCTCTTGTCCTGTTTGTTGCAAAACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAGTACCGAAAAGGGCCTGAATCTCTGAGGGGTACCCAACCAACAGGTATGCTTAGGCTTCCATGCTATTGTTGTTCCCCAGGTTGCAGGAACAACATTGATCACCCAAGAGCAAAGCCCCTCAAAGATTTCAGAACTCTTCAAACACACTACAAGAGGAAGCATGGAATTAAGCCCTTCATGTGTAGAAAATGTGGCAAGGCTTTTGCTGTGAGAGGTGATTGGAGAACCCATGAAAAGAACTGTGGGAAGCTTTGGTATTGCATATGTGGCTCTGATTTCAAGCACAAGAGGTCTCTTAAAGATCACATCAAAGCTTTTGGAAGTGGCCATGCAGCTTATGGGATCGATGGCTTTGAAGAAGAAGAAGAGCCTGCATCAGAAGTAGAACAAGACAATGACTAA 1098 0.4781 MADPYSNFFSPPFFHYPSPNPSPHHHPYAHNFINQTTTTTTTTNINQGTFFHFHHHHHFQTTATSCSSSPPSPPLREALPLLTLSPKNDEEQEEDYQDQGQVCTAMDVEEDYNRNLHNPKEEEHEEDGDDSVTVALHIGLPSPSAAEIASVLSSACTADKGQQQGGGGDSNNNGSEDSSSGFLSNRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEEEPASEVEQDND 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00294 365 ProSitePatterns Zinc finger C2H2 type domain signature. 209 229 IPR013087 -
Spst7g00294 365 SUPERFAMILY beta-beta-alpha zinc fingers 273 311 IPR036236 -
Spst7g00294 365 FunFam Zinc finger protein WIP2 260 342 - -
Spst7g00294 365 Gene3D Classic Zinc Finger 206 229 - -
Spst7g00294 365 PANTHER ZINC FINGER PROTEIN WIP2 37 363 IPR043584 GO:0003700|GO:0010468
Spst7g00294 365 ProSiteProfiles Zinc finger C2H2 type domain profile. 291 311 IPR013087 -
Spst7g00294 365 ProSiteProfiles Zinc finger C2H2 type domain profile. 207 234 IPR013087 -
Spst7g00294 365 SMART c2h2final6 207 229 IPR013087 -
Spst7g00294 365 SMART c2h2final6 291 311 IPR013087 -
Spst7g00294 365 MobiDBLite consensus disorder prediction 157 182 - -
Spst7g00294 365 Gene3D Classic Zinc Finger 269 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00294 Spst-Chr7 2291385 2293602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00294 1 365 C2H2 Transcription Factor Family AT3G57670 60.914 3.33e-146 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst7g00294 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00294 - - gmx:100783088 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00294 7 2291385 2293602 Spst7g00294 7 2291385 2293602 ECH
Spst7g00294 7 2291385 2293602 Spst5g00375 5 3093729 3095718 ECH
Spst1g03359 1 42200927 42203326 Spst7g00294 7 2291385 2293602 PCT