Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00289 ATGGAAGACTATGAAGTGATTCAGCAAATTGGAAGAGGAGCACTTGGTGCAACTTTTCTTGTTTTACACAAGATTGAGAAAAAGAGGTATGTGCTGAAGAAAATTCACTTGTCCAAACAAGCAGACAAATCCAAAGAAACAGCACTACAAGAGGTTACTATGGACCTGATAGCTAAACTTAATCACCCTTATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGATGTTAAACTTTTGCAAGGACAAAAAGGACCGTGGGATAAATCGTGAAGTGTTTCCGACTGCGAATGTAAAGAAAGCTCGGGGATCTTATTTTTCAGAGGAGAAAGTCTGCAAATGGTTGACTCAGTTGTTACTAGCTGTGGACTACCTTCACTCCAATAGGGTACTCCACAGAGATCTTAAGTGTTCCAACATATTCCTGACCAAAGAAAATAACATTCGGCTAGGTGAATTTGGTCTTGCAAAGCTTCTTAACACTGAAGACCTTACTTCCCCGGCTGTTGGAACTCTAAACTACATGTGTCCTGAGGCCTTTGCTGGTATGCCTTACGGTTATAAATCGGATATGTGGTCACTTGGTTGCTGCATGTTTGAAATTGTTGCACATCAACTGGCATTTCGTGCTCCAGACAGGACTGGGCTTATCAATAAAATAAATAGATGCTCCGTTTCTCCAATGCCAATTGTTTACTCGTCCACACTGAAACAACTTATCAAGAGCATGCTGAGGAAAAACCCAGAGCATAGACCAACAGCATCTGAATTATTAAGGCATCCTCATTTACAACCTTATGTTCTACGCTGTCGTAATGCTTCATCTATTTATCTACCAGTACATCTTATAAATAGTAACTCTCCAAAGGATAAAACAAAAAACAAATCTAGTGGTGGCAAAGACCATTGGGACAAGGAGGCAGGGTTGGCAGGATTAGTAAATCGTTTGGATCGAATTTATCCATTTGAGGGAAATGGAGATGTACAGACGCGGAACCGCCATAATGACGGCAAGCTAGCAGTGCCAATCAGCGCCAAAGACAACCTTGAGACCAAAATGGTTGATTCTACCAGTTACACTCTGGAATTTTCTACAAGTATTAGTGGATCAAAAGATGACTCAACAACATCTGAATCAACCGTTTGCAGTGTGTGCAAGGAAGGAGACTTTAAAAATAAATTTGCAAGGGACACGGCTGACAGTGAGATCACTTCAAAGAGTACAATACATTGTGTGCATGAAGAACAAGGAGTTACTACTCTCAAGTCATATGCAATTGACATAAATACAGTAATTAAAAATGAAGATAGTTTTTCCATTGAAGATTTCAATACAGATGAAGCACTGAGTGAAGGTGCCAAACCTGAGGAGTCCATTAAATCAACCATGTCCAGTGAAGACAGCAACAGTAATGATAAGGATGAGTCCATCGATGAGATCATGTCAAAGAGTACCCTAGATTCTGTGCATGAAGATCAAGGATCTACGGCTGATCATTTTCAGAAGTCAGGTATGATTGACCCAAGCGCAGTATCTACAAAAGTAGAAGATGATTTTTCCAATGAAGGTTTTGATAAAATGGAAGCAGAGAGGGAAAATGCCAAACCTGAGGACTCTGGACACTCACTAGTGTCCATTGAAAACAGCGAAGGTAATGATAATGATGGGTCCATTAATGAGATCACTTCAAAGAGTATGCTAGAATCTGCGCATGATGAACATAAATTTGCTGCTGAACATTTTCCGAAGTCAGATGTGATTGACTCGAATGCAGTGGTTACAAAAGTTGAAGACAATTTTTCCAATGAAGCTTTTGACCAAACTGAAACAGAGAGTAAAAATGCCAAACATGAGGACTCCAGAATATCAGTAGTGTCCAATGAAAACAGTGATAGTAATGATAATGATGGGTCCATTGATGAGATCAGATCAAACAGTACACTCGATTCTGTGCCTGAAGAGCAATGGTTTATTGCTAAACATGTTCAAAAGTTGGATGCAGACAAAATTTCTAATGAAGGTTTTAATAAAGCTGAAGCACAGAGGGAAGATGCCAAACTTGAGTGCTGCAGTAAATCAGTTTCCTACGATAACAGCAATGGTAATGATGAAGATGGACCTGGTGGTGAGATCACGTCAAAGAGTATGGTAGATTCTGTAGGTGAAGAACAACGACTCGCTGATGAACATTTTCAGAAGTCTGATGCAATTGACATAAATGCAGTGACTACAGAAGTTGAAGATAAACTTTCCAATGAAGGTTTTGATAAAGCTGATACACAGGAGAAAGATGCTAAACCTGAGGACTCTATAAAATCTTTGTCCAGTGATGTCAGCAGCTGCAGTGATAAAGATGTGTCCATTGATGAGGAAAGGTCATCATCGCCAATGGCACAAGCTGTTAAGGTTGAACGTGACACTGAAACTGGAAGCAGCTTGAAGGAAAATGAAAACCTTGAAGCATTTAAGGAAGGCACACGCATGGACAGCTTGACTTCTGATACTAACAACACGCATCTAGGTAAGGATGAAAGCAGAGAAAACACACACACAATCAGTTGTTCAACGTGTAAAGAAGACAATAATGCTGTCGTGGCCAATAAGCCAGCAAATGGCATTTCATCAAGCACACGTATTTCAAGAGGCAGTAATACTTCCTGCCAGCAAAGAGCTGATGCTCTGGAATCCCTGCTTGAGTTATGTGCTCAGCTACTTCAGCAAGGTAAACTTGAAGAGCTTGGTGCTGTGCTAAGACCATTTGGAGAAGATGCTGTATCTGTGTCATCCAGAGAAACAGCAATATTGCTTACGAATAGCCTCATGGCCTCACAAAAACTTAATTCTAAAACGTAG 2853 0.4031 MEDYEVIQQIGRGALGATFLVLHKIEKKRYVLKKIHLSKQADKSKETALQEVTMDLIAKLNHPYIVEYKDAWVEKMLNFCKDKKDRGINREVFPTANVKKARGSYFSEEKVCKWLTQLLLAVDYLHSNRVLHRDLKCSNIFLTKENNIRLGEFGLAKLLNTEDLTSPAVGTLNYMCPEAFAGMPYGYKSDMWSLGCCMFEIVAHQLAFRAPDRTGLINKINRCSVSPMPIVYSSTLKQLIKSMLRKNPEHRPTASELLRHPHLQPYVLRCRNASSIYLPVHLINSNSPKDKTKNKSSGGKDHWDKEAGLAGLVNRLDRIYPFEGNGDVQTRNRHNDGKLAVPISAKDNLETKMVDSTSYTLEFSTSISGSKDDSTTSESTVCSVCKEGDFKNKFARDTADSEITSKSTIHCVHEEQGVTTLKSYAIDINTVIKNEDSFSIEDFNTDEALSEGAKPEESIKSTMSSEDSNSNDKDESIDEIMSKSTLDSVHEDQGSTADHFQKSGMIDPSAVSTKVEDDFSNEGFDKMEAERENAKPEDSGHSLVSIENSEGNDNDGSINEITSKSMLESAHDEHKFAAEHFPKSDVIDSNAVVTKVEDNFSNEAFDQTETESKNAKHEDSRISVVSNENSDSNDNDGSIDEIRSNSTLDSVPEEQWFIAKHVQKLDADKISNEGFNKAEAQREDAKLECCSKSVSYDNSNGNDEDGPGGEITSKSMVDSVGEEQRLADEHFQKSDAIDINAVTTEVEDKLSNEGFDKADTQEKDAKPEDSIKSLSSDVSSCSDKDVSIDEERSSSPMAQAVKVERDTETGSSLKENENLEAFKEGTRMDSLTSDTNNTHLGKDESRENTHTISCSTCKEDNNAVVANKPANGISSSTRISRGSNTSCQQRADALESLLELCAQLLQQGKLEELGAVLRPFGEDAVSVSSRETAILLTNSLMASQKLNSKT 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00289 950 MobiDBLite consensus disorder prediction 746 849 - -
Spst7g00289 950 SMART serkin_6 4 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00289 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Spst7g00289 950 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 899 - -
Spst7g00289 950 MobiDBLite consensus disorder prediction 467 497 - -
Spst7g00289 950 MobiDBLite consensus disorder prediction 693 734 - -
Spst7g00289 950 MobiDBLite consensus disorder prediction 609 624 - -
Spst7g00289 950 MobiDBLite consensus disorder prediction 807 824 - -
Spst7g00289 950 MobiDBLite consensus disorder prediction 542 559 - -
Spst7g00289 950 ProSiteProfiles Protein kinase domain profile. 4 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00289 950 Gene3D Transferase(Phosphotransferase) domain 1 96 306 - -
Spst7g00289 950 SUPERFAMILY Protein kinase-like (PK-like) 2 284 IPR011009 -
Spst7g00289 950 MobiDBLite consensus disorder prediction 446 559 - -
Spst7g00289 950 MobiDBLite consensus disorder prediction 749 771 - -
Spst7g00289 950 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Spst7g00289 950 MobiDBLite consensus disorder prediction 518 538 - -
Spst7g00289 950 MobiDBLite consensus disorder prediction 601 651 - -
Spst7g00289 950 Pfam Protein kinase domain 4 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00289 950 MobiDBLite consensus disorder prediction 625 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00289 Spst-Chr7 2232182 2239933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00289 8 264 MAP Kinase Kinase Kinase AT4G08500 29.771 1.23e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Spst7g00289 Pkinase 5.6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00289 K08857 - gmx:100818558 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00289 7 2232182 2239933 Spst7g00289 7 2232182 2239933 ECH
Spst1g03353 1 42172057 42176983 Spst7g00289 7 2232182 2239933 PCT