Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00288 ATGGGAAAGAAGAAGAGAAGTAGGGTTTCGGACGACGAGGAAATTGAATCGGACACCTATCCTTCTGATCACGATGAATACAACCTTTACCAGGCTCTTGGTGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAGGCATACTACAAATTGGCATTGAGGCTGCATCCTGATAAGAACCCCAATGATGAGGAAGCTAAAGCAAAGTTTCAGCAATTGCAGCATGTTATCTCAATTCTTGGGGATGAAGAAAAACGAGCTGTTTATGATCAGACTGGTTGTATTGATGACGCCGAGCTTGCAGGGGATGTTGTCCAGAATCTTAAAGAATATTTCAGAGCTATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATTGACCTGTACAAGAAATGCAAGGGTAATATGAACAGAATATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGATTCACATCGATTCAAGGATATTCTTGATGAGACTATAGCTGCTGGAGAACTGAAGGAAACAAAAGCCTACAAGAAATGGGGAAATAAAATATCAGAGACCAAGCCACCTACTAGTCCCTTAAAAAGGCGGGCAAAATCATCAAATAAGCAATCAGAAACAGATCTGTGTGCTATCATATCACAGCGTAGACACGAGAGGAAAGATCGCTTTGATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGGTCAAATGCCAGAACCCTCTGAAGAAGAATTTGAAGCTGCACAGAGAAAGATGGAAAAGCGAAGGTCCTCAAAAAAGTCAAAGCGAAAATGA 843 0.4045 MGKKKRSRVSDDEEIESDTYPSDHDEYNLYQALGVERTASQQEIKKAYYKLALRLHPDKNPNDEEAKAKFQQLQHVISILGDEEKRAVYDQTGCIDDAELAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMNRIFCSMLCSDPKLDSHRFKDILDETIAAGELKETKAYKKWGNKISETKPPTSPLKRRAKSSNKQSETDLCAIISQRRHERKDRFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKMEKRRSSKKSKRK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00288 280 MobiDBLite consensus disorder prediction 1 15 - -
Spst7g00288 280 MobiDBLite consensus disorder prediction 195 222 - -
Spst7g00288 280 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 20 280 IPR042977 -
Spst7g00288 280 MobiDBLite consensus disorder prediction 198 222 - -
Spst7g00288 280 Pfam DnaJ domain 28 90 IPR001623 -
Spst7g00288 280 ProSiteProfiles dnaJ domain profile. 28 93 IPR001623 -
Spst7g00288 280 Gene3D DnaJ domain 14 101 IPR036869 -
Spst7g00288 280 CDD DnaJ 28 82 IPR001623 -
Spst7g00288 280 PRINTS DnaJ domain signature 85 104 IPR001623 -
Spst7g00288 280 PRINTS DnaJ domain signature 48 63 IPR001623 -
Spst7g00288 280 PRINTS DnaJ domain signature 30 48 IPR001623 -
Spst7g00288 280 PRINTS DnaJ domain signature 65 85 IPR001623 -
Spst7g00288 280 SMART dnaj_3 27 85 IPR001623 -
Spst7g00288 280 MobiDBLite consensus disorder prediction 1 23 - -
Spst7g00288 280 MobiDBLite consensus disorder prediction 245 280 - -
Spst7g00288 280 SUPERFAMILY Chaperone J-domain 25 99 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00288 Spst-Chr7 2226053 2228632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00288 30 90 C2H2 Transcription Factor Family AT1G74250 40.909 3.37e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00288 K09529 - gmx:100781463 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00288 7 2226053 2228632 Spst7g00288 7 2226053 2228632 ECH
Spst1g03351 1 42155951 42157913 Spst7g00288 7 2226053 2228632 PCT