Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00286 ATGAAATTCAAGAAAATGATTAATCGGTTGCCTGATCACGCTGTCAGCACCCGTGAAACCGAGCACGCAGGTTGTCATAAAACAATGGAGTCTCACGATGAAACAGGATGCCAGGCTCCAGAAAGGCCCATTCTTTGCATTAACAATTGTGGCTTCTTTGGAAGGGCTGCCACCATGAATATGTGCTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGAACAAGACAAACTTGCAGCAGTGTCGGTTGAAAACATTGTGAATGGCGGTTCTGGCTGCAGCGGGAAACAGGCTGTGACTGCAGGTTTGGTGGATGTACAAGTTGGAAATGTGGAGACAAAGACAGTCTCTGCTGAGATTTCTGGGGATTCATCATCTGGTCAGAATGTGGAGTTGAAAGCTAAGACAGGTCCCAGCAGATGTGCTACGTGCCGGAAGCGTGTTGGATTAACAGGTTTCAGCTGCAAATGTGGGAACCTCTTTTGTGCAATGCACCGCTATTCTGACAAACACGATTGCCCCTTTGATTATCAGAGTGTTGGCCGTGAGGCTATAGCTAAAGCCAACCCCACAATTAAGGCTGATAAGCTTGATAAAATCTAG 603 0.466 MKFKKMINRLPDHAVSTRETEHAGCHKTMESHDETGCQAPERPILCINNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAAVSVENIVNGGSGCSGKQAVTAGLVDVQVGNVETKTVSAEISGDSSSGQNVELKAKTGPSRCATCRKRVGLTGFSCKCGNLFCAMHRYSDKHDCPFDYQSVGREAIAKANPTIKADKLDKI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00286 200 SMART A20_3 43 67 IPR002653 GO:0003677|GO:0008270
Spst7g00286 200 Pfam AN1-like Zinc finger 141 178 IPR000058 GO:0008270
Spst7g00286 200 ProSiteProfiles Zinc finger A20-type profile. 40 74 IPR002653 GO:0003677|GO:0008270
Spst7g00286 200 Gene3D - 28 87 - -
Spst7g00286 200 FunFam Zinc finger AN1-type containing 6 114 196 - -
Spst7g00286 200 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 45 80 - -
Spst7g00286 200 Gene3D - 115 196 IPR035896 -
Spst7g00286 200 SMART AN1_Zf_4 141 178 IPR000058 GO:0008270
Spst7g00286 200 PANTHER AN1-TYPE ZINC FINGER PROTEIN 41 200 - -
Spst7g00286 200 SUPERFAMILY AN1-like Zinc finger 132 195 IPR035896 -
Spst7g00286 200 ProSiteProfiles Zinc finger AN1-type profile. 135 181 IPR000058 GO:0008270
Spst7g00286 200 Pfam A20-like zinc finger 44 67 IPR002653 GO:0003677|GO:0008270
Spst7g00286 200 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00286 Spst-Chr7 2215708 2218509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00286 33 200 C2H2 Transcription Factor Family AT3G52800 43.787 5.01e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00286 - - gmx:100499995 300.056