Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00285 ATGGAACCCTCGAACATCACCACCCAAAGTTCAGAGCCACGTTACCCTACACGTGCGAAAACTTCTCGAACCTTGTTCTATGATTTTGGAACCCCCAATTCCACACAGCATCAAGTTCCGAGTCCAGACCCAAAACATGTTCAAGGAACCCAATTTCCTTCACACTCAACACCAATGGAGAAAGCACCAGAAGAAACCAGCGTGGTTGGCTCAGAAGAAATTGATTTCGGAATAAGAGAACAAGTTAAGCAAAAACGATATCGTAAACGGAATTTCAAGAAAACAAGCTCAATTTATCGAGGAGTGACAAAGTGTAAGGGACGTTTCGAATCCTTTGTGTGGGATAAGGACCTCAAAACAACTGGAAAGAGAGGAAAAACAGGTGGATTCAAGAATGAACTTGAAGCAGCAAGAGCTCACGATTTGATTGCCATTAAGATATGGGGCAAGTTTGCATACACAAATTTTCCAATGACTTTCTATTTGAAGGAAATCTCAGAAATGGAAAAATGGAGTCTAAGAGAATATATTCTTGAACTCAGAAGGCAAAGCAAGGACCCTTCAACTACTGTGACGGATGGAAGTAACGTCTCCAGTTCTGAAGGTGGAGGAGCTTCAGCTGAAGTGGAAGAAAACAATGTAGTTGGTGATGCATTGTCAAACCCTGAATCCACCACCACAATGCCACCAATGTTAGATGAGAGTGGTCAACAATCTGAAGCACCAACAGCTTTAGAAAACGGAGATGAGAATAATGCTGAAGAGAACAAAATTCTGTGTGATGATGAGTATCCATGGTCAGATGTTGACCTAAGTTTCCCTCTTTGGCCATGTGCTTTTGGCGATGCACCAGTTGAGGAGCATGCCAATGCCTTAGGCAGTGCCCTAAATAGGGAGTCCTCAATGAGTAGTGAGAATCCAGCAGGAGCAGAAAATGGCAGTGTTGCTTCATTTGGGTCAGGTTCTCCTAACGTTCAACAATTTGAAGCATTTGTTCATAGGTATGAACCTCTCCAACATGAGCTTGACAACAACACCCATTCCGAAGATGAGGAGGACATGGTTGTTGACAACGATTTCGACATAAGCGAGTATCTGAATCTCGACGACATGGATGATTAG 1122 0.4305 MEPSNITTQSSEPRYPTRAKTSRTLFYDFGTPNSTQHQVPSPDPKHVQGTQFPSHSTPMEKAPEETSVVGSEEIDFGIREQVKQKRYRKRNFKKTSSIYRGVTKCKGRFESFVWDKDLKTTGKRGKTGGFKNELEAARAHDLIAIKIWGKFAYTNFPMTFYLKEISEMEKWSLREYILELRRQSKDPSTTVTDGSNVSSSEGGGASAEVEENNVVGDALSNPESTTTMPPMLDESGQQSEAPTALENGDENNAEENKILCDDEYPWSDVDLSFPLWPCAFGDAPVEEHANALGSALNRESSMSSENPAGAENGSVASFGSGSPNVQQFEAFVHRYEPLQHELDNNTHSEDEEDMVVDNDFDISEYLNLDDMDD 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00285 373 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 57 186 - -
Spst7g00285 373 SUPERFAMILY DNA-binding domain 97 158 IPR016177 GO:0003677
Spst7g00285 373 MobiDBLite consensus disorder prediction 296 322 - -
Spst7g00285 373 MobiDBLite consensus disorder prediction 217 246 - -
Spst7g00285 373 MobiDBLite consensus disorder prediction 184 251 - -
Spst7g00285 373 CDD AP2 97 157 IPR001471 GO:0003700|GO:0006355
Spst7g00285 373 ProSiteProfiles AP2/ERF domain profile. 98 157 IPR001471 GO:0003700|GO:0006355
Spst7g00285 373 SMART rav1_2 98 163 IPR001471 GO:0003700|GO:0006355
Spst7g00285 373 MobiDBLite consensus disorder prediction 1 61 - -
Spst7g00285 373 MobiDBLite consensus disorder prediction 184 206 - -
Spst7g00285 373 Gene3D AP2/ERF domain 98 159 IPR036955 GO:0003700|GO:0006355
Spst7g00285 373 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00285 Spst-Chr7 2208880 2211605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00285 92 184 AP2-EREBP Transcription Factor Family AT5G17430 44.000 5.48e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00285 K09285 - gmx:102665149 306.605