Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00284 ATGGTTCGGAACGATCATGTCAACAAGGAGAAGGAGAGAGACCTTGAGTTTCTGCTGGATCACAACGATGACGATGCCGACCAACATCAGGACATTGAAGCTGACAAGTATGAGAGTAGCAGTGAAGGGGACACTGACGACGACGACGATGATGATGATGATGATGATGCAAATGGGAGACCACAGGCTCACTCTTTCTCTTCTCAGCAATGGCCTCAAAGTTATAAAGAGACTACGGATTCTTATACAATAGCTGCTGCTCCAAATCTTGAGTCAGTTTTTCGAGGGCCGAGTTTTATGTATTCTAGCTTTGACAATCGTTCAAAGAGTAGCTTAGACATTGATGGCAAGACACCTTTTCTATCTTCTGAAGCCATTAATCAATCAACTTGGTGGGAGAAAGCCTCAGTACAACGCCATTTTTCTGGAGAATTGCCCATTGGATATGGATGCAGCTTCACTCAGACAATTTTCAATAGCATTAATGTGATGGCTGGAGTTGGCCTTCTATCTACACCATATACAGTGAATCAAGCTGGGTGGATGGGCATTGCAGTCATGCTTCTTTTTGCAGTTATTTGTTGTTACACAGCCACCCTTATGAGACAATGCTTTGAAAGCAGAGAAGGAATCATTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGTCGTATTGCTGTATCGTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGCACATCCTTAAATCTGGGTAGTTTCCAGTTAGACACTGTGCACCTGTTTGGAGTTTTGACAGCCCTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGCATAGTCTCTTATCTATCAGCTGGAGGGGTTGTTGCAACACTTGTGATTATTATCTGTGTGTTTTGTGTTGGAACCACAAACGGTGTTGGATTCCATCAAACTGGTCAATTGGTTAAATGGAATGGCATTCCATTTGCTATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAATATTTACCAGTCTATGGCTGACAAGAAACAATTTACCAAAGCACTAATAACATGTTTTACTTTGTGTGTTTTGATATACGGAAGCGTTGCTATCATGGGATTTCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACGGTTATTAACACATATGCTTTGTTGATGAACCCACTGGCAAGGAGTTTAGAGGAGTTGCTGCCAGACAGAATTTCATCTACATATTGGTGTTTCATTCTTCTTAGAACAGCACTTGTTGCATCTACAGTTTGTGTTGCTTTTCTGGTTCCCTTTTTTGGGCTTGTGATGGCTTTAATTGGTTCCCTCTTTAGTATACTTGTGTCAGCGATAATGCCATCTTTATGCTTCCTGAAAATTATTGGGAAAAAAGCTACAAAGATACAGATGGTACTGAGTGTGGGCATTGCTGCATTCGGAATCATTTGTGCACTCCTTGGAACATATTCCTCTGTGTTGAGTATTGCAGACAGTTACTGA 1587 0.4152 MVRNDHVNKEKERDLEFLLDHNDDDADQHQDIEADKYESSSEGDTDDDDDDDDDDDANGRPQAHSFSSQQWPQSYKETTDSYTIAAAPNLESVFRGPSFMYSSFDNRSKSSLDIDGKTPFLSSEAINQSTWWEKASVQRHFSGELPIGYGCSFTQTIFNSINVMAGVGLLSTPYTVNQAGWMGIAVMLLFAVICCYTATLMRQCFESREGIITYPDIGEAAFGRYGRIAVSSYCVEFITLEGDNLTSLFPGTSLNLGSFQLDTVHLFGVLTALIILPTVWLKDLRIVSYLSAGGVVATLVIIICVFCVGTTNGVGFHQTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALITCFTLCVLIYGSVAIMGFLMFGDGTLSQITLNMPPGAFASKVALWTTVINTYALLMNPLARSLEELLPDRISSTYWCFILLRTALVASTVCVAFLVPFFGLVMALIGSLFSILVSAIMPSLCFLKIIGKKATKIQMVLSVGIAAFGIICALLGTYSSVLSIADSY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00284 528 MobiDBLite consensus disorder prediction 1 79 - -
Spst7g00284 528 MobiDBLite consensus disorder prediction 61 79 - -
Spst7g00284 528 Pfam Transmembrane amino acid transporter protein 152 520 IPR013057 -
Spst7g00284 528 PANTHER OS05G0424000 PROTEIN-RELATED 155 508 - -
Spst7g00284 528 MobiDBLite consensus disorder prediction 1 39 - -
Spst7g00284 528 MobiDBLite consensus disorder prediction 40 56 - -
Spst7g00284 528 Gene3D Amino acid/polyamine transporter I 150 526 - -
Spst7g00284 528 FunFam Amino acid transporter AVT1A 149 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00284 Spst-Chr7 2198817 2202724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00284 2 463 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.411 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00284 K15015 - gmx:100790344 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00284 7 2198817 2202724 Spst7g00284 7 2198817 2202724 ECH