Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00275 ATGGATGATATTCAAGGATACATACCAATATTCCTTATTTTCCTAGCCTTAATAATATTGCTTCAAGCCATACTCAAACCTTCAAAATTTCGTCTTCCTCCTAGTCCTTTGGCTTTACCAGTTATTGGACACTTCCACTTGGTAAAACCACCACTTCACAGATCTTTTCAGAAGCTCTCAAATCGTTATGGACCCTTGATTCACCTCTACCTTGGCTCCACTCCCATTGTTGTTGTTTCCTCAGCAGAAATAGCCAAAGAGATCTTCAAAACACATGAACTTTCTTTCTCCAACAGACCAGCAAATGTTGCTATCAGATATCTCACTTATAACTCGTCTGATCTGGGGTTTGCCCCTTATGGACCCTACTGGAAGTTCATGAAGAAGCTTTGCATGTCAGAACTTTTTAATGGTAGGATGCTGGATCAATTCCTGCCCATTAGGAAAGAGGAGATAAATGAAAAAGCTGTTTCAAAGGATGAGGCTCACAAAGTGACAGAAAGGGTGAAGGATTCTGCCAAGGTGAGTGGAATGTTTAACCTAGCAGATTATTTCTGGTTTTGTAGGGGATTGGATCTTCAGGGAATTGGGAAGAGAATGAAGGAGGTTCGTGAGAGGTTCGACATCATGATGGAAAGTATCATTCAGGAACATGAAGATGCAAGAAATAAATCGACCAGAAAGGATGCTCCAAAAGATGTTCTCGATGCTCTTTTGAGTATTTCTGAAGATGAAAGCTCAGATGTGAAAATAACCAGAGACAACATTAAAGCCTTATTAGTGGACATGTTCACAGGTGGGACAGACACAACTGCAGTTACTCTAGAGTGGTCACTGGCAGAACTAATTAACCATCCAACAGTAATGGAGAAAGCAAGGAAGGAGATTGACTGCATCATTGGCAAAGACAGAATGGTAATGGAAATAGATATAGATAATCTTCCTTATCTCCAAGCCATAGTGAAGGAGACACTGAGGCTTCACCCTCCATCTCCATTTGTATTGAGAGAGTCAACTAAGAATTGCACCATTGCTGGATATGACATTCCAGGAAAGACTCAGCTTTTCACTAATGTGTGGGCTATTGGTAGGGATCCAAAGCATTGGGATAACCCTCTTGAGTTTAGGCCACAAAGGTTTCTTAGCAAAGACAATGAGAGCGGAAAAATGGGTCAAGTTGATCTCAGGGGACAACATTATCAGCTTTTGCCTTTTGGAAGTGGAAGAAGAGGGTGCCCTGGAACTTCACTAGCACTAAAGGTTGTTCACACCACCCTTGCTGCTATGATTCAGTGCTTTGAATGGAAGGGTGAAGAAAACAACGAAGAATATTGTGGCAGTGTTGACATGAAAGAGGGACCCTCATTTATTCTTTCAAGAGCTCAATCCATGATTTGTATCCCAAAACAAAGACTCGTGTCATGCTAA 1428 0.4132 MDDIQGYIPIFLIFLALIILLQAILKPSKFRLPPSPLALPVIGHFHLVKPPLHRSFQKLSNRYGPLIHLYLGSTPIVVVSSAEIAKEIFKTHELSFSNRPANVAIRYLTYNSSDLGFAPYGPYWKFMKKLCMSELFNGRMLDQFLPIRKEEINEKAVSKDEAHKVTERVKDSAKVSGMFNLADYFWFCRGLDLQGIGKRMKEVRERFDIMMESIIQEHEDARNKSTRKDAPKDVLDALLSISEDESSDVKITRDNIKALLVDMFTGGTDTTAVTLEWSLAELINHPTVMEKARKEIDCIIGKDRMVMEIDIDNLPYLQAIVKETLRLHPPSPFVLRESTKNCTIAGYDIPGKTQLFTNVWAIGRDPKHWDNPLEFRPQRFLSKDNESGKMGQVDLRGQHYQLLPFGSGRRGCPGTSLALKVVHTTLAAMIQCFEWKGEENNEEYCGSVDMKEGPSFILSRAQSMICIPKQRLVSC 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00275 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Spst7g00275 475 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PANTHER CYTOCHROME P450 98A9 159 472 - -
Spst7g00275 475 SUPERFAMILY Cytochrome P450 33 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 CDD CYP93 64 468 - -
Spst7g00275 475 Gene3D Cytochrome P450 25 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 Pfam Cytochrome P450 176 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 Pfam Cytochrome P450 33 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 FunFam Cytochrome P450 family protein 153 466 - -
Spst7g00275 475 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS E-class P450 group I signature 358 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst7g00275 475 PRINTS E-class P450 group I signature 318 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00275 Spst-Chr7 2107584 2114922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00275 1 468 Cytochrome P450 AT5G06900 43.418 7.59e-155 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00275 K24188 - gmx:100811919 739.569