Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00269 ATGGTTTGCCACTACGTGTACGTAAATCTCGCATTCGTTGTCTTCTCGGCAACTTTGATTTCTCGCTGTTTCGCATTTACGGATCCGGCTGACGTCACCGCTCTCCAGGATCTATACAGGGCCTTAAATAACCCTCCAGTGCTGCATGGATGGAACGGTAATGATCCTTGTAAGGAATCTTGGACGGGAGTAGCATGTTCTGGGTCATCAGTTATACACCTCAAAATTAAAGGATTAAACCTTACCGGGTATCTTGGACGCTTGCTCAATAATCTACAGAACTTAAAGCAATTTGATGTCAGTTTTAACAATATACTTGGAGAAATTCCACAGGGTTTACCCCCGAATGCGACGCATATAAATATGGCATGCAACTATTTCAGTCAAAATATCCCCCATTCACTGTCAACAATGACAAAACTAAGACACCTGAATTTAAGCCACAATTTCTTGTATGGATCCATTGGCAATGTGTTTACTGGTTTAGATAATCTCAAAGAAATGGACCTTTCGAACAATAATTTCACCGGTGATCTGCCAAGTTCATTTGGTTCCTTGACCACACTGGATAGATTGTATCTGCAGAATAATAGATTCACCGGATCAGTCACCTACCTGGCCGAGCTTCAACTCATTGATTTGAACATTCAAGACAATCTGTTTAGCGGCATTCTTCCACAGCATTTTCAGACCATACCAAACTTATGGATTGGAGGGAATAAGTTCCAAGCCGTGGACGACTCCCCTCCCTGGGCATTTCCTTTGGACAACGTACCCATTGAGCAAGACACTAGTCGCCCACCCATAACTCAGGCAAATACCATCGAGAACTATGGTCCTCTTAGAGTAAGGAAACAAAAAAAGAAACGTATCACTCCCGGAGGAATAGCTTTTATGGTCGGTGCAGGAACATTATTAGCAACAGGTTTCGCTCTCTTCATCGCGATCCGTTTGAATAAGCTTTATACGAAGAGACTGGAGAACTATGAAAGCGACCATAGTTCATTGCCTTCTTATCCAATCAGTGCAGCCAAAGAGGATTCTACTACGGTAGATGAGAGCCTGCAAATCCCACCTTATAATGCTTCATCCCTTATGGGTCCAAGGCGATTAACTTCTCAAACACATAAAAGAACCGGGGAAACATCAAGAAAAAGCTTTTCTGGAAGAGACCGATTCAATGGAAGGACAAAAGTTTATACAGTAGCGGAGGTTCAGTTGGTTACAAACAGTTTCCATGAAGACAACCTTCTGGGAGAGGGATCCCTTGGTCCTGTTTATAGAGCTGAATTCCCAGATAACAAGGTTTTAGCCGTGAAGAATATCAACATGGCGGGCAAGTCTTTCAGTGAAGATGAAAAGTTCTTAGATGTCGTGTGCACGGCTTCCCGTTTGAAGCACCCTAACATTGTTTCACTTAAAGGCTACTGTTTGGAGCATGGACAACATCTTCTTGTCTTTGACTATGTCAGAAATTTAACTCTAGATGATGCTCTTCATAGTATAGCATACAAACCTTTATCGTGGGGCACCCGTCTCCGGATCGCTTTAGGTGTTGGTCAGGCCCTGGACTATTTGCACTCGACGTTCTCCCCTCCTGTTGCCCATGGCAAATTAAAGGCTACCAATGTGCTACTGGACGAAAACCTCATGCCTCGTGTTACTGACTGTGGCTTGGATATTCTGAGACCACTGACAGGCAATAAAGTCAAAATTCGGGCTTCCGAGATTGATATTAGAGATACAGGATACAGTTCACCTGACCATGGTCAACCAGGAATTGGCAGCACGAAGAGTGACATCTTTGCCTTTGGAGTGTTGCTTCTTGAACTTTTAACAGGAAGAAAACCTTTCGATGGTTCCAGGCCAAGGGAAGAGCAATATCTGGCAAAGTGGGCTTCATCTAGGCTTCATGATACTGACAGTTTGGAACAGATGGTGGATCCAGCAATCAAACGGACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGCATTCAGCCCGTAAAGGAATTTCGACCTCCAATGTCTGAAATCGTGGACAATCTAGTATCATTTTCTCAAAAGATGGTTTCAAAGAGTGGTGTAGCAGATGGTACTGAACTTGACCCACTTGACAGGTCATTTCACACAACCACCTCCCGCTTTAACGGTTCACCCGCTCTGAGCTATGTATCAGCCTGA 2199 0.4379 MVCHYVYVNLAFVVFSATLISRCFAFTDPADVTALQDLYRALNNPPVLHGWNGNDPCKESWTGVACSGSSVIHLKIKGLNLTGYLGRLLNNLQNLKQFDVSFNNILGEIPQGLPPNATHINMACNYFSQNIPHSLSTMTKLRHLNLSHNFLYGSIGNVFTGLDNLKEMDLSNNNFTGDLPSSFGSLTTLDRLYLQNNRFTGSVTYLAELQLIDLNIQDNLFSGILPQHFQTIPNLWIGGNKFQAVDDSPPWAFPLDNVPIEQDTSRPPITQANTIENYGPLRVRKQKKKRITPGGIAFMVGAGTLLATGFALFIAIRLNKLYTKRLENYESDHSSLPSYPISAAKEDSTTVDESLQIPPYNASSLMGPRRLTSQTHKRTGETSRKSFSGRDRFNGRTKVYTVAEVQLVTNSFHEDNLLGEGSLGPVYRAEFPDNKVLAVKNINMAGKSFSEDEKFLDVVCTASRLKHPNIVSLKGYCLEHGQHLLVFDYVRNLTLDDALHSIAYKPLSWGTRLRIALGVGQALDYLHSTFSPPVAHGKLKATNVLLDENLMPRVTDCGLDILRPLTGNKVKIRASEIDIRDTGYSSPDHGQPGIGSTKSDIFAFGVLLLELLTGRKPFDGSRPREEQYLAKWASSRLHDTDSLEQMVDPAIKRTFSSKALSRYADIISLCIQPVKEFRPPMSEIVDNLVSFSQKMVSKSGVADGTELDPLDRSFHTTTSRFNGSPALSYVSA 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00269 732 Pfam Leucine Rich Repeat 140 153 IPR001611 GO:0005515
Spst7g00269 732 Gene3D Phosphorylase Kinase; domain 1 371 489 - -
Spst7g00269 732 SUPERFAMILY Protein kinase-like (PK-like) 389 688 IPR011009 -
Spst7g00269 732 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 253 - -
Spst7g00269 732 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 377 489 - -
Spst7g00269 732 Gene3D Ribonuclease Inhibitor 28 258 IPR032675 -
Spst7g00269 732 ProSiteProfiles Protein kinase domain profile. 412 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00269 732 MobiDBLite consensus disorder prediction 374 388 - -
Spst7g00269 732 Pfam Protein tyrosine and serine/threonine kinase 415 688 IPR001245 GO:0004672|GO:0006468
Spst7g00269 732 Pfam Leucine rich repeat 158 199 IPR001611 GO:0005515
Spst7g00269 732 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Spst7g00269 732 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 692 IPR046959 -
Spst7g00269 732 MobiDBLite consensus disorder prediction 358 388 - -
Spst7g00269 732 MobiDBLite consensus disorder prediction 358 373 - -
Spst7g00269 732 SUPERFAMILY L domain-like 27 237 - -
Spst7g00269 732 FunFam Leucine-rich repeat receptor-like protein kinase 490 699 - -
Spst7g00269 732 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00269 Spst-Chr7 2050390 2056066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00269 10 732 Strubbelig Receptor Gene Family AT5G06820 53.731 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Spst7g00269 PK_Tyr_Ser-Thr 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00269 - - vum:124845744 1239.56