Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00268 ATGGATTCATCACCGGCGAACAGAGAGAGCGAAAACGGTGCACAAGGAAACGAGGTGGGAGAAGATGACTACATGGGTGACCTTTCTCAGTTTCTTCCTTCAGATGCTTACGACCCTCCCAATATGTCTTCGTCCAGAAAGATTTCCAGCAAGAAAGACCCTTCAGTCAACCCTTCAAAGAACCGGTTGAAAACTCTTAATTGGCAAGAGCGGCGAAAACTTGAAAGAGACAGGAAGCAACAAGAAGAGGATGAGCTAACATTAGCAAAAGTTGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAGATGGGTTATACTCCAGGTTCTGCCCTTGGCAAGCAGGGTTCAGGCAGGGCTGAACCAGTGGGGATTGAAATTCGACGGTCACGAGCTGGTGTAGGATTAGAAGATCCCCACAAGGAGAAGAGGAAAAAGGAGGAAATCATGATGGACAGGAAAAGGAGGAAAGAAGAGGACCTAATGAAAGAATTTGGGTCCAGGCAGAAGTCACAGTGGCAGAGTAAGAGAATCATAATTAATTATAATAAGGCAAAGGCTGCCCTTGACCAATTGGAAAATAGGGAAATTGTGGAGCCACAAAAGAATGAGGACGATGCAGAGGATGAAGAAGAAGAGGAGGAAGAAATAACAGAAGAGGAACTGAACGATGTTTTGATGAGACTGAGGGATGAATTTAATTATTGCCTATTTTGTGGATGCCAATACGAATCAAGTGATGCCCTTCTGACCAACTGCCCAGGAACCAATGAAGATGATCACTAA 798 0.4436 MDSSPANRESENGAQGNEVGEDDYMGDLSQFLPSDAYDPPNMSSSRKISSKKDPSVNPSKNRLKTLNWQERRKLERDRKQQEEDELTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGVGLEDPHKEKRKKEEIMMDRKRRKEEDLMKEFGSRQKSQWQSKRIIINYNKAKAALDQLENREIVEPQKNEDDAEDEEEEEEEITEEELNDVLMRLRDEFNYCLFCGCQYESSDALLTNCPGTNEDDH 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00268 265 SMART DUF4187_2 211 265 IPR025239 -
Spst7g00268 265 SMART G-patch_5 95 141 IPR000467 GO:0003676
Spst7g00268 265 MobiDBLite consensus disorder prediction 36 64 - -
Spst7g00268 265 MobiDBLite consensus disorder prediction 135 170 - -
Spst7g00268 265 MobiDBLite consensus disorder prediction 195 225 - -
Spst7g00268 265 Coils Coil 148 168 - -
Spst7g00268 265 Coils Coil 179 199 - -
Spst7g00268 265 PANTHER UNCHARACTERIZED 21 265 IPR039249 -
Spst7g00268 265 MobiDBLite consensus disorder prediction 1 85 - -
Spst7g00268 265 MobiDBLite consensus disorder prediction 207 225 - -
Spst7g00268 265 Pfam G-patch domain 97 140 IPR000467 GO:0003676
Spst7g00268 265 Coils Coil 207 236 - -
Spst7g00268 265 MobiDBLite consensus disorder prediction 65 85 - -
Spst7g00268 265 MobiDBLite consensus disorder prediction 134 177 - -
Spst7g00268 265 Pfam Domain of unknown function (DUF4187) 212 265 IPR025239 -
Spst7g00268 265 ProSiteProfiles G-patch domain profile. 97 143 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00268 89 139 C2H2 Transcription Factor Family AT5G26610 45.098 6.88e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00268 - - gmx:100777380 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00268 7 2047277 2049316 Spst7g00268 7 2047277 2049316 ECH