Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00262 ATGAACGACTACAAGATTGATTGTGTTGGACGGATTCAACAAAGCTTTGGTTTAAATGGGGATTTTAATTCAGAGTTTGGCAGTTGTTCTAGTCAATATTTTGATATCATACAGGCTTCAAACATGGCAAGTTGCAATCAGCCACTTGCTATTGCCAGTGGTGGAGGGATGGAACAGGAACCACACACAGGCCAAATCAAATCATCTAGCAGCATTATCAGCCGTTTTGAGTCACCAGCTTCAGCCTTTTATGCAACAGAAATCTGCATGGGTTTCCCACAATATGATAGACTAGTTGGTAATCCCTCTTTGATATCTCAATTTTCTAAGATTAGTGATGTGGAATTCCCTTTGTATCAAGCTCCCAAGCAAAACCTTTTCTTGGCTTCATTGGCAAACCAACCTGCTCCCAACTTTGAGTTGTCAAATCCCTTGCAAGCAATGCTCATATCTCATGTGAGTCGTGATCAATGTATTAGATCTCCTGAAAAATCCAATAAAATTCCATGTGGGAATTTCCTTGGCAGCAGTTTTCTTCCAATCGAACAACCTAAGTTGTTCATTGATGCTGCTGCAAGCCCTTCAATTCCTTCTAAGGGAAATCAGGATCAAACAGATTCTTGTGCCTCATATAATTTACCTGCTACACAGATTATCTTCTCTTCTCAGCAAGAGATGCTGTCACCAACACTCTCAGCAGGTAGCTTGTTAACTTCTTCTGGAAACTCTACTTCAAATGGACCAGTGGTCTCAAGTAAAACAAGAATAAGATGGACTCAGGAACTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAAGCAACGCCAAAAGCAATATTGAGGCTAATGGAATCAGATGGATTGACCATCTTCCATGTTAAAAGTCATCTGCAGAAATATAGAATTGCCAAATACATGCCACAATCAACTCAAGGGAAATCTGAGAAAAGAACCAATGTAGAGCATGTGCATCTTGATGCCAAAACTGGATCGCAAATTAGAGAGGCACTTCAGTTGCAGCTAGATGTTCAGAGGCATCTTCATGAACAGCTAGAGATTCAGAGAAAATTACAGCTGAGGATTGAGGAACAAGGTAAGCAGCTGAAAATGATGTTCGACCAACAGCAGAAGACAAGTGGAACTATGTATCATTCTTCGCGGGAGCCGAACGGAGTTCATTGCAGTGTGACCAACTTTGGAGGCTCAGAAAAGAACAGCTTCAACTTCCAACAACATGGGCGACATTTGTTTGATGTTCCCGTTTCGTGTTTGAACTTCGATTCGCAAAATTTCCTGTTTCAATATTCTGGGGACAACTCGGGTCCACTGTTCGGAAATGTTGTTGATTCCTTCTTGTCCAGAAATGAAGACACGTTCTGTGAAGGGTATGGTGAACTTTACGAGCATTTCAGAAACGAACATGACAACATCTTGGAGGATGCTGCTTCTGCCCCAGTTAATCGGTCAGCTGGTTCTTTTTCTATGCTAGAGGAGGCTCTGCGCATCAGCAGTGAGTAG 1533 0.4201 MNDYKIDCVGRIQQSFGLNGDFNSEFGSCSSQYFDIIQASNMASCNQPLAIASGGGMEQEPHTGQIKSSSSIISRFESPASAFYATEICMGFPQYDRLVGNPSLISQFSKISDVEFPLYQAPKQNLFLASLANQPAPNFELSNPLQAMLISHVSRDQCIRSPEKSNKIPCGNFLGSSFLPIEQPKLFIDAAASPSIPSKGNQDQTDSCASYNLPATQIIFSSQQEMLSPTLSAGSLLTSSGNSTSNGPVVSSKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPQSTQGKSEKRTNVEHVHLDAKTGSQIREALQLQLDVQRHLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSGTMYHSSREPNGVHCSVTNFGGSEKNSFNFQQHGRHLFDVPVSCLNFDSQNFLFQYSGDNSGPLFGNVVDSFLSRNEDTFCEGYGELYEHFRNEHDNILEDAASAPVNRSAGSFSMLEEALRISSE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00262 510 SUPERFAMILY Homeodomain-like 251 307 IPR009057 -
Spst7g00262 510 Pfam Myb-like DNA-binding domain 257 306 IPR001005 -
Spst7g00262 510 NCBIfam myb-like DNA-binding domain, SHAQKYF class 253 308 IPR006447 GO:0003677
Spst7g00262 510 Gene3D - 252 311 - -
Spst7g00262 510 FunFam Myb family transcription factor 252 310 - -
Spst7g00262 510 Pfam MYB-CC type transfactor, LHEQLE motif 337 383 IPR025756 -
Spst7g00262 510 Coils Coil 339 359 - -
Spst7g00262 510 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 252 310 IPR017930 -
Spst7g00262 510 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 237 405 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00262 Spst-Chr7 2016001 2025260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00262 238 386 G2-like Transcription Factor Family AT4G28610 59.091 2.61e-49 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst7g00262 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00262 - - gmx:100780919 583.178