Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00247 ATGTTTTCGTGGCTGGCAAGGATAGTGTCGGCTTGCTTGAGACCGGTGAGGCGATATGCGCGTATGAGCAAGGATGATTTCGACGACGCTGCCGCCGCCAGCGACGCGCTCGTGTGGCACCGGGACCTCGAGAAGCACTCGTGCGGCGAGTTCTCCTTCGCTGTCGTGCAGGCCAACGAAGTCATCGAGGATCAAAGCCAGGTAGAGACCGGCGCCGACGCTGTCTTCGTCGGCGTCTACGATGGACACGGCGGCGCTGAAGCCTCGCGCTTCATCAACGATCACCTCTTCCATAATCTCATGAGGGTTGCTCAAGAAAATGGTTCTATGTCTGAAGATATTATCAGAAATGCTGTTTCTGCTACTGAGGATGGGTTTCTGACTCTTGTTCGAAGGAGTTATGGAATAAAGCCATTGATAGCAGCCATGGGTTCTTGTTGTCTGGTTGGTGTTATCTGGAAAGGAACACTATATATTGCAAATCTCGGAGACTCCCGTGCTGTGATCGGTTCTGTAGGTAGATCAAACAAGATCGTTGCTGAACAGTTGACCAAAGAGCACAATGCTAGCAAAGAGGAGGTTAGACGAGAACTCAGGTCTTTGCATCCAGAAGATTCGCAAATTGTAGTTATGAAGCAAGGAACCTGGCGCATTAAAGGCATCATCCAGGTATCAAGATCCATAGGAGATGCATATTTGAAACGCCCGGAGTTCTCGTTCGATCCATCGTTCCCGCGGTTCCACCTGCCTGAACCTATCCGCCGACCTGTGCTAACAGCAGAACCCTCCATATGTTCAAGAGTTTTAAGACCTAATGATAAGTTCATTATCTTTGCATCTGATGGACTTTGGGAGCATTTGACAAACCAGGAAGCTGCTGAGATTGTTCATAACAATCCAAGAACCGGGATTGCAAGAAGACTTCTTATGGCGGCTTTGAACGAGGCAGCTAGGAAAAGGGAAATGAGATATAAAGACCTTCAGAAGATTGGAAAGGGGATTAGGCGTTTCTTCCATGATGATATCACAGTGGTTGTTGTCTTCATTGACCATGAGTTGGGTAGCAAGAAGGTTACAGTTCCTGAGTTGTCCATCAAAGGGTTTATTGACACAGTTGGACCATCAAATTTTAGAAATTTGCGGGGATTGGAATGA 1155 0.4788 MFSWLARIVSACLRPVRRYARMSKDDFDDAAAASDALVWHRDLEKHSCGEFSFAVVQANEVIEDQSQVETGADAVFVGVYDGHGGAEASRFINDHLFHNLMRVAQENGSMSEDIIRNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVIWKGTLYIANLGDSRAVIGSVGRSNKIVAEQLTKEHNASKEEVRRELRSLHPEDSQIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSICSRVLRPNDKFIIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLLMAALNEAARKREMRYKDLQKIGKGIRRFFHDDITVVVVFIDHELGSKKVTVPELSIKGFIDTVGPSNFRNLRGLE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00247 384 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Spst7g00247 384 PANTHER PROTEIN PHOSPHATASE 40 347 IPR015655 GO:0004722|GO:0006470
Spst7g00247 384 Coils Coil 180 200 - -
Spst7g00247 384 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Spst7g00247 384 FunFam Probable protein phosphatase 2C 42 41 357 - -
Spst7g00247 384 SUPERFAMILY PP2C-like 56 350 IPR036457 -
Spst7g00247 384 Gene3D - 22 358 IPR036457 -
Spst7g00247 384 Pfam Protein phosphatase 2C 69 316 IPR001932 -
Spst7g00247 384 CDD PP2Cc 51 349 IPR001932 -
Spst7g00247 384 SMART PP2C_4 44 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00247 Spst-Chr7 1909518 1917294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00247 1 377 PP2C-type Phosphatase Gene Family AT5G06750 70.103 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00247 K01102 - gmx:100778238 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00247 7 1909518 1917294 Spst7g00247 7 1909518 1917294 ECH
Spst7g00247 7 1909518 1917294 Spst3g01682 3 20647348 20659319 ECH
Spst1g03303 1 41580098 41583812 Spst7g00247 7 1909518 1917294 PCT