Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00243 ATGGCTTCCTTCAACACCACTTTTGTGCTCAACATTAGTCCACAAACAACCCCTGGTGGAGAAGGCTTGGCCTTTATCTTAACTTCAGATATCACTCTCCCAGAAAACAGTGATGGAGAATGGCTTGGTATTGTAAATGCTAGTTCTAATGGAACTTCACAGGCTGGTATTCTTGCAGTGGAGTTTGACACAAGAAAAAGTTTCCCAGAAGATGGCCCTGACAACCATGTTGGCATCAACATAAACAGCATCAACTCCATTAACCAGGCCCCATTAATAAACACTCGGGTCAATCTTTCGTCTGGTCAAGATGTCAAATTTCTCATTCAGTACTTCAATGACACAATATCAGTTTTTGGTGCCATGAATGGAACTTCAGGAGAATCTATGGAGACCCTTTTGGTATCTCCACCTCTTAACCTATCTTCCATTCTTCAACAAGAGGTTTACCTTGGTTTCTCCGCCTCAACAAGTAACTACACGGAGCTGAACTGTGTAAGATCGTGGGAATTCAGTGGTGAAGATATTGGAGATAATCACAAAAGTCTATTGTGGGTTTATGTCACTGTTCCAGTTGTGATTGTTTTTCTTGTCATAGGTGGGTTGGTGATCTTTTTCTGGTGCTGGCAAAGGAGTCGCCAAAGGGAGAGTCCAGAAGATGCCTATCCAAGGATAGAGGATCAGATTCAATATTCCTCCATGGCTCCAAAGAAGTTTAGGCTAAGGGAAATAACAAAAGCAACTGGTGGATTCAGCCCTCAAAACAAGCTTGGAAAAGGTGGGTTTGGAACTGTCTATAAGGGGCTATTGGAAAATAAGGAGGTAGCTGTGAAGAGAATCTCCAAGAACTCACGCCAAGGGAAGCAAGAGTTTGTGGCAGAAGTGACAACAATTGGAAGCCTTCACCATAGAAATTTGGTGAAACTCACTGGTTGGTGCTACGAGAATAGAGAGCTCCTCCTTGTGTATGAGTTCATGCCTAATGGCAGCCTGGACAAGTACCTCTGTGGTGACCAAAATTTTGGTAATGATGACGTTGAAGGAGGGTATTCTTTAATACTGGATTTGGAAACAAGGCACCGAGTGATTCATGGTGTGGCTCAAGCACTTGACTACCTTCACAATGGGTGTGAGAAGAGGGTTCTCCACAGAGACATCAAGGCCAGCAACATAATGCTGGACTCAGATTACAATGCCAAGTTGGGAGACTTTGGATTGGCTAGAACAATTCAGCAAAGAAATGAAACACACCACTCTACAAAAGAGATTGCAGGCACACCTGGGTACATGGCCCCAGAAACCTTTCTCACGGGGAGGGCAACAGTGGAGACAGATGTGTACGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAAAGGCCGGGGAATGTGTATGCACAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGATTTGTATGGGAAGGGAAAAATAGTTGGTGCTGTTGATTCAAGGTTGACAAAGGAGGGGATTAAGGTTGAAGAAGTGGAATGCGTTCTTGTTCTTGGCTTGGCTTGTTGCCATCCAAATCCACACCAAAGGCCATCCATGAGAACTGTTCTTCAGGTTCTGAATGGGGAAGCACCTCCACCTGAAGTGCCTAAGGAAAGACCAGCTTTTATGTGGCCTGCTATGCCTCCATCCTTCAAAGAAGCTGAAGATAGCTCCCTCGTCCAGGGAACACTCACTCCATTCACTGAAATCACTGGCAGATGA 1746 0.4467 MASFNTTFVLNISPQTTPGGEGLAFILTSDITLPENSDGEWLGIVNASSNGTSQAGILAVEFDTRKSFPEDGPDNHVGININSINSINQAPLINTRVNLSSGQDVKFLIQYFNDTISVFGAMNGTSGESMETLLVSPPLNLSSILQQEVYLGFSASTSNYTELNCVRSWEFSGEDIGDNHKSLLWVYVTVPVVIVFLVIGGLVIFFWCWQRSRQRESPEDAYPRIEDQIQYSSMAPKKFRLREITKATGGFSPQNKLGKGGFGTVYKGLLENKEVAVKRISKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYENRELLLVYEFMPNGSLDKYLCGDQNFGNDDVEGGYSLILDLETRHRVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPGNVYAQDDYKNSIVYWVWDLYGKGKIVGAVDSRLTKEGIKVEEVECVLVLGLACCHPNPHQRPSMRTVLQVLNGEAPPPEVPKERPAFMWPAMPPSFKEAEDSSLVQGTLTPFTEITGR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00243 581 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 172 IPR013320 -
Spst7g00243 581 Gene3D - 1 175 - -
Spst7g00243 581 FunFam Probable L-type lectin-domain containing receptor kinase S.5 236 325 - -
Spst7g00243 581 ProSiteProfiles Protein kinase domain profile. 251 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00243 581 CDD STKc_IRAK 257 536 - -
Spst7g00243 581 SUPERFAMILY Protein kinase-like (PK-like) 232 534 IPR011009 -
Spst7g00243 581 Gene3D Transferase(Phosphotransferase) domain 1 326 539 - -
Spst7g00243 581 CDD lectin_legume_LecRK_Arcelin_ConA 2 172 IPR001220 GO:0030246
Spst7g00243 581 Gene3D Phosphorylase Kinase; domain 1 236 325 - -
Spst7g00243 581 PANTHER - 3 541 - -
Spst7g00243 581 Pfam Protein kinase domain 254 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00243 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 381 393 IPR008271 GO:0004672|GO:0006468
Spst7g00243 581 Pfam Legume lectin domain 2 178 IPR001220 GO:0030246
Spst7g00243 581 ProSitePatterns Protein kinases ATP-binding region signature. 257 278 IPR017441 GO:0005524
Spst7g00243 581 FunFam probable L-type lectin-domain containing receptor kinase S.5 326 540 - -
Spst7g00243 581 SMART serkin_6 251 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00243 Spst-Chr7 1878605 1880350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00243 1 543 Receptor kinase-like Gene Family AT3G53810 38.732 2.30e-118 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst7g00243 Pkinase 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00243 - - gmx:100785031 994.571