Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00242 ATGCAGCTTCCTTGGTTCGTCAAGCATCAATTAGCAGCAACCATCTTCATTATCGTAGCCTTACCAAAAGTTACCAGCCTTTATTTCAATTTCTCTTCCTTCCAACCACAGGATGAAGCTCATTTATTGATGAACCAGAATTCAAAAATATACTTAAGTGCCATTCAAGTGACCCCTGACATTCGTGGTCCTATCTCAAACTATTCTGGCAGGGTCTTCTATAAAGAACAACTGAAGTTATGGGACAGTCAAAGAGGCATGAAAGTTTCATTCAACTCAACTTTTGTTTTCACAGTTAGTCCTCAAACCTCTCCTGGTGGTGAGGGATTGGCTTTCATATTGACAGACGATACCTCTCTTCAACTTAACAGTGGAGGCCAATGGCTTGGTATTGTCAACTCAACAAGCATAGGGGTAACCGAGATAGTTGCAGTGGAGTTTGATACAAGGAAAAGCTACCCTGAAGATGTTGATGACAACCATGTTGGGGTGGATGTAAAGAGCATCTATTCCATCCAGCAAGAACCTCTAGGACCACATGGTGTTAATATTTCTGGTGGATACGATGTTGTTGCTACAATTCAGTTTGATGCTAAAGATGGGAAAATGACCATTTTTGTTAGTACGTTGGGAGATTTGATGAGACCAGTGTTTATGGTGGATCTTGATCTCTCTAAACTGCTTCCACAAGATGTTTTTGTGGGATTTTCAGCTTCAACGGGAGAGTATACGCAGCTCAACTCAATAAGATCGTGGTATTTTTATAGCTGGGAGGAGTATATTGAGAAGAATCCCAAAAATCTAACATGGTTATGGATCTTGATTCCCATAGTTGGGGTTGGAGGAGCATGTGTGCTTGCCAGTGTCTGCTATTGGAGAAAAAAACACATAAACGGACAAGGGGTGGAGGAAGATATGAAAATAGAGCTTGAAATCAAAAGTTCTTCCAATGCTCCACATAAATTTCAGCTGAAGGAGCTTTTATCAGCCACAAGGAATTTCCACCCATCAAACAAGCTTGGGAAGGGAGGATTCGGGATGGTTTATAAGGGAACCTTAAACGACAAAGATGTTGCTGTGAAGAGGATTTCAAAGAATTCACGTCATGGTAAGCAAGATTTTATAGCAGAAATCACAACCATAGGGAATCTCAATCACAAAAATCTAGTGAAGTTAATAGGATGGTGCTATGAAAAGGGTGAGATCCTCCTCGTGTACGAACTCATGCAAAATAGGAGCTTAGACAGATTCATTTTTTCAACTTCGGGAGGGGATTCAACTCTGAGCTGGGAAAAGAGGCTTAGTGTTATATGTGGGGTTTCTCGGGCACTAGACTATCTTCACAATGGATGTGATAAAAGAGTGCTACATCGAGACATAAAACCAAGCAATGTGATGTTGGATTCAGACTTCAATGCTCGGCTTGGAGACTTTGGCTTAGCTCGCACCATTCATCTTAGTGAAAAATCTCACCACTCAACAAGAGAAATTGCTGGAACACCAGGGTACATGGCGCCAGAAAGCTTACACACCCAAAGGGCTTCAGTTGAAACTGATGTCTACGCATTTGGTGTTCTGATCTTGGAAGTTGTGTGTGGAGGAAGAAAGGCTGAACACAAACAGCACCTGCAATGTTGTAACAACATTGCAGACTGGGTTTGGGAGCTTCATGGCAAAGGAAACATAACTGATGCTGTGGATTTGAGACTGAATGATGATTTTGACAAGGCTCAAGCCAAGTGTGTGCTTGAGTTAGGGTTAGCATGTTGTCATCCTAACCCATATGAGAGGCCATCGATGAGAACTGTGCTGCTAGTGCTGATAGGGGAAGCATCTCCACCATTTGTAGCAATTGAGAAACCTGCTTTCACTTGGCCTGCCACTGCTCCTGTTCTCAATGAAGAGTTAAATTTCCAAGTAACAGTATCCCAAAATGAACCAATAACAGAACTGAAAAGTGGGAGATGA 1968 0.4197 MQLPWFVKHQLAATIFIIVALPKVTSLYFNFSSFQPQDEAHLLMNQNSKIYLSAIQVTPDIRGPISNYSGRVFYKEQLKLWDSQRGMKVSFNSTFVFTVSPQTSPGGEGLAFILTDDTSLQLNSGGQWLGIVNSTSIGVTEIVAVEFDTRKSYPEDVDDNHVGVDVKSIYSIQQEPLGPHGVNISGGYDVVATIQFDAKDGKMTIFVSTLGDLMRPVFMVDLDLSKLLPQDVFVGFSASTGEYTQLNSIRSWYFYSWEEYIEKNPKNLTWLWILIPIVGVGGACVLASVCYWRKKHINGQGVEEDMKIELEIKSSSNAPHKFQLKELLSATRNFHPSNKLGKGGFGMVYKGTLNDKDVAVKRISKNSRHGKQDFIAEITTIGNLNHKNLVKLIGWCYEKGEILLVYELMQNRSLDRFIFSTSGGDSTLSWEKRLSVICGVSRALDYLHNGCDKRVLHRDIKPSNVMLDSDFNARLGDFGLARTIHLSEKSHHSTREIAGTPGYMAPESLHTQRASVETDVYAFGVLILEVVCGGRKAEHKQHLQCCNNIADWVWELHGKGNITDAVDLRLNDDFDKAQAKCVLELGLACCHPNPYERPSMRTVLLVLIGEASPPFVAIEKPAFTWPATAPVLNEELNFQVTVSQNEPITELKSGR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00242 655 SMART serkin_6 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00242 655 Gene3D - 25 268 - -
Spst7g00242 655 CDD lectin_legume_LecRK_Arcelin_ConA 27 256 IPR001220 GO:0030246
Spst7g00242 655 FunFam probable L-type lectin-domain containing receptor kinase S.5 409 613 - -
Spst7g00242 655 CDD STKc_IRAK 340 607 - -
Spst7g00242 655 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00242 655 Gene3D Phosphorylase Kinase; domain 1 312 408 - -
Spst7g00242 655 PANTHER - 54 614 - -
Spst7g00242 655 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Spst7g00242 655 SUPERFAMILY Protein kinase-like (PK-like) 315 607 IPR011009 -
Spst7g00242 655 Pfam Legume lectin domain 27 260 IPR001220 GO:0030246
Spst7g00242 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 273 IPR013320 -
Spst7g00242 655 FunFam serine/threonine-protein kinase PBS1-like 301 408 - -
Spst7g00242 655 ProSiteProfiles Protein kinase domain profile. 334 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00242 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Spst7g00242 655 ProSitePatterns Protein kinases ATP-binding region signature. 340 361 IPR017441 GO:0005524
Spst7g00242 655 Gene3D Transferase(Phosphotransferase) domain 1 409 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00242 Spst-Chr7 1871843 1873810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00242 5 625 Receptor kinase-like Gene Family AT5G55830 35.778 6.18e-121 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst7g00242 Pkinase 7.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00242 - - qsa:O6P43_009469 877.856