Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00229 ATGGACAAGACAACAACAACAACTACTTCGGAGAGAGAAATCCACGATTTCATGAACGTGGACTCCTTCTCCCAACTCCCTTTCATCCGCCCCGCTCCTCTTGTTAAAGAAAAGTCGGGCATTCGTCTCTTTGGTATAGAATTCGCCGGCGGGAATAATACGGTTGTTTCCACCGACCAGTCTGAATCTGCCGAAACAACAGCCAACAATAACCTCAACTCATTCGACCTTGATGGTAACAAGGATGATACTACTACAGCCACCACCACTGTCACTGTTACTGACACCAACGGCGAAAGCAGTCGCCGGTTTGAGTGCCACTACTGCTGCCGGAACTTCCCCACCTCCCAAGCCCTCGGCGGTCACCAAAACGCGCACAAACGCGAACGCCAACACGCGAAACGCGCGCACCTTCAGTCAACGATGGTGCACGGAAGCACGTTCTCCGATGCGCACCATGTCTACAACCTCATGAACTACCGCTTCGGTTCCGCTCCAACACCGCCAATGCCGTATCCTACGTGGAACAACGCCGCTGCCACCGCTACCAGCACGAGATTCTACGGAACGACACCGTTTTCCCACAGCCACCACCAGCACCAACAACCCATTAACGGAAACCCTTTGGCTTTGTGGCGAATCCCGAGCAACAACCCTAGTTTCAGCCACGAACGGTCGTCGTTGCCGTCTTTGTTCGCGTCGGAGGAAATAACGAACTTGAGATCCTCGCAGGTTGTGGGAGCCTCGGGGTCGCAAAACCGCTACGTGTATGACTCTAAACGTGGAAGTGTGCACGACCATGTGAGTTTGGATCTTCATCTGTAA 825 0.5321 MDKTTTTTTSEREIHDFMNVDSFSQLPFIRPAPLVKEKSGIRLFGIEFAGGNNTVVSTDQSESAETTANNNLNSFDLDGNKDDTTTATTTVTVTDTNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDAHHVYNLMNYRFGSAPTPPMPYPTWNNAAATATSTRFYGTTPFSHSHHQHQQPINGNPLALWRIPSNNPSFSHERSSLPSLFASEEITNLRSSQVVGASGSQNRYVYDSKRGSVHDHVSLDLHL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00229 274 MobiDBLite consensus disorder prediction 58 81 - -
Spst7g00229 274 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Spst7g00229 274 SUPERFAMILY beta-beta-alpha zinc fingers 101 132 IPR036236 -
Spst7g00229 274 PANTHER ZINC FINGER PROTEIN GIS 1 274 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Spst7g00229 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00229 Spst-Chr7 1722242 1723066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00229 8 274 C2H2 Transcription Factor Family AT2G41940 39.427 1.11e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00229 - - vun:114190818 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00229 7 1722242 1723066 Spst7g00229 7 1722242 1723066 ECH
Spst1g03270 1 41200733 41201452 Spst7g00229 7 1722242 1723066 PCT