Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00219 ATGGCTGTGGCCTCAAAATTCTCACGCCGCTTCTTCAATAATCCGTTTCCCCTCTTCTCCTTCCATTTCTCATCCTCCACAGCTTCATCGTTGCCGCCTCCAATCCGAGTCGCGCTCACCGACTCCGTGGGCCGCGCCGTCTTCGCCACGCGCTCCATCGCCGCCGCCGACCTCATCCACACCGCCAGCCCCGCCGTCTGCCACCCCTCTTCCGCCCGCCCCGCCTGCTACGCCTGCCTCGCCTCGCTTCCCCACTCCCAACCTCTCCGCTCGCCCTTTTGCAGCCAACACTGCCACCAGCGATCCAAGGGATATTACGATGTTGAGATGAATGCAAATTGGGTGGCTTTTGATGACTATTGTGGGACTCGTGGTTTGAAGTATCCCTTTCTGGTAAAGCGATTGGTTTGCATGGTCATATCAGGAGATGCCAGAAGTGACACTCTTGACATACTTCAGCCTGCCAATTTTACGCCTGAGATGGTCTCAGAGATGGAGGAGGAGTTTGTCTTGCTAAAGAGTGCCTTCACGAAGGCACTTATTGGAGATGAACATATTGCCTTTTTAACTAAGCAATGGTACATCAATGTTTTGGCACGAATTCGAATCAATGCATTTCGCATCGAGTTGGCCGGAGGACCGTATGAAGATCTTCTATCATTAGCTGTTGCATCTGTGGAAGCTGAGGCTGCTGTTGGAAATGCCGTCTATGTACTTCCATCCTTCTACAATCATGATTGTGATCCTAATGCACACATCATATGGATAGACAACGCTCATGCAAAATTGAAGGCACTCCGTGACATTGATGAAGGAGAAGAACTCAGAATCTGCTATATTGATGCCAGCCTGGACCGCGATGCCCGACGAGAGCTACTGTTTCGAGGTTTTGGTTTTCAATGCAATTGTCATAGGTGCTTACATGGCGATTAG 933 0.5091 MAVASKFSRRFFNNPFPLFSFHFSSSTASSLPPPIRVALTDSVGRAVFATRSIAAADLIHTASPAVCHPSSARPACYACLASLPHSQPLRSPFCSQHCHQRSKGYYDVEMNANWVAFDDYCGTRGLKYPFLVKRLVCMVISGDARSDTLDILQPANFTPEMVSEMEEEFVLLKSAFTKALIGDEHIAFLTKQWYINVLARIRINAFRIELAGGPYEDLLSLAVASVEAEAAVGNAVYVLPSFYNHDCDPNAHIIWIDNAHAKLKALRDIDEGEELRICYIDASLDRDARRELLFRGFGFQCNCHRCLHGD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00219 310 Gene3D SET domain 46 306 IPR046341 -
Spst7g00219 310 CDD SET_SMYD 233 306 - -
Spst7g00219 310 Pfam SET domain 44 279 IPR001214 GO:0005515
Spst7g00219 310 SUPERFAMILY SET domain 31 306 IPR046341 -
Spst7g00219 310 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 31 308 - -
Spst7g00219 310 ProSiteProfiles SET domain profile. 33 280 IPR001214 GO:0005515
Spst7g00219 310 Gene3D - 124 205 - -
Spst7g00219 310 Gene3D - 75 123 - -
Spst7g00219 310 SMART set_7 33 286 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00219 Spst-Chr7 1618328 1622631 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst7g00219 SET 2.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00219 - - gmx:100801270 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00219 7 1618328 1622631 Spst7g00219 7 1618328 1622631 ECH