Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00212 ATGGCCGACATCGTTCCCGAAGCTGGCGTAGTTCCAGATCCCACCCAAATCGATGTCAAGCTCTTCAACCGCTGGAGCTTCGAAGACATTCAGGTTAATGACATTTCTCTTGCTGATTATATCGGAGTGGTGTCGTCGAAGCACGCCACGTATGTTCCTCACACTGCCGGTAGGTACTCGGTGAAGCGGTTCAGGAAAGCGCAGTGCCCCATTGTTGAGAGGCTCACCAATTCTCTCATGATGCATGGAAGAAACAATGGAAAGAAGCTCTTGGCTGTCAGGATTATCAAGCATGCTATGGAAATTATTCACTTGCTCACTGACCAGAACCCAATTCAGGTCATTGTTGACGCCGTCATCAATAGTGGTCCCCGTGAAGATGCAACAAGAATTGGTTCTGCTGGTGTGGTGAGGAGACAAGCCGTTGATATTTCACCCCTTCGACGTGTTAATCAGGCTATCTATCTTCTAACAACAGGTGCACGAGAAGCTGCTTTTAGAAATATTAAGACAATTGCTGAATGCTTGGCTGATGAACTTATTAATGCCGCAAAAGGTTCATCCAACAGTTATGCCATCAAGAAAAAGGACGAGATTGAAAGAGTTGCCAAGGCTAATCGTTAA 624 0.4615 MADIVPEAGVVPDPTQIDVKLFNRWSFEDIQVNDISLADYIGVVSSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00212 207 CDD uS7_Eukaryote 20 207 IPR005716 GO:0003735|GO:0006412|GO:0015935
Spst7g00212 207 Gene3D Ribosomal protein S7 domain 5 207 IPR036823 -
Spst7g00212 207 FunFam 40S ribosomal protein S5 6 207 - -
Spst7g00212 207 Coils Coil 195 207 - -
Spst7g00212 207 Pfam Ribosomal protein S7p/S5e 61 207 IPR023798 -
Spst7g00212 207 ProSitePatterns Ribosomal protein S7 signature. 73 99 IPR020606 GO:0003723|GO:0003735|GO:0006412
Spst7g00212 207 PANTHER RIBOSOMAL PROTEIN S7 17 207 IPR000235 GO:0006412
Spst7g00212 207 SUPERFAMILY Ribosomal protein S7 20 207 IPR036823 -
Spst7g00212 207 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 4 207 IPR000235 GO:0006412
Spst7g00212 207 NCBIfam 30S ribosomal protein S7 19 207 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00212 Spst-Chr7 1538047 1540081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00212 18 207 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 91.053 1.78e-131 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00212 K02989 - gmx:100305898 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00212 7 1538047 1540081 Spst7g00212 7 1538047 1540081 ECH