Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00199 ATGCCTTTAGCGAAGCAACGAGCCAGGGGTTCCCTGAAAACAACTAGGGGTTTCGGTTTGAGACCACGGAAGCAGCGAAATCGTGGAGGACAGACATTTTTCACGACCGTGGCGAGCTCTCAACGATTCCAACTCCACTCGGTTGTTCAACGGAATACTCCGTTCAACGGCAAGGTGAGAGAAAAAGTGCTTTGGAGTTGCGCTTTGGACTGGCCTGGAAGTGAAGGGTTCGCGGACGGAAGGGTTGGTGAAGGAGAACGAGAAGACGGTGGAGGTTATGGAGGCGCTGGAGTGAAGACTTTGACGTTCGATCCACGCGGCGACGGCATTCTAGAATTTGGAAATCCGAAATTCGAAATCCTCAACCTAGAGGATCGTTTTCCGTTGGAGATAGATCTTGGAAGTGGAATCTCGCGCGTTCGTGAAAAGCTTTCAACTCCGATGGGCAACAACTGTGTGGGACCGAACGCCGGCAACGGCTTTATCCAGTCTGTCACGGCGGCTGTGTGGAAGACGCGGCCGCCGGAGCCCCACCTTACCCTGCCTTCTGGAGAGACCAAAACCTCGTCTCCGGCACCGAACGCCGAGAAAGCCTCGGAACGCGCGCCTCCCCGACCCGCGGATCCTCCGATGCCGGTGCAGAGCACACCGCCAGAGCCAGTGAAAATGCCCACCGTGCCGGTCGCGAAGCCGCTCCCGCTGGACCACGAGAAGCCGGCATCGAGCCACACAGAGCCAGTTCCAGCGGAGAAGCCGAAGAAACCCACGCACGTGAAACGCGTGTCCAGTATGGGACTTCAAGTGGACTCGGTGCTGGGTCGAAAAACAGAGAACATGAAGGAGTTCTTCAGCTTGGGAAGGAAGCTGGGGCAGGGGCAATTCGGGACGACGTTTCTGTGCGTACAAAAGGGGACGAACAAGGATTTTGCGTGCAAGTCTATAGCGAAGCGCAAGTTGACGACTCAGGAAGATGTGGAGGATGTGAGGAGGGAGATTCAGATCATGCACCACTTGGCGGGGCACCCCAACGTGATTCAGATCGTTGGGGCTTTCGAGGACGCCGTTGCAGTGCACGTCGTGATGGAACTCTGCGCTGGCGGGGAGCTCTTCGACAGAATCATACAGAGGGGGCATTACACGGAGAGGAAGGCCGCGGAACTTGCTAGGTTGATTGTTAGTGTGGTGGAGGCTTGTCACTCTCTCGGTGTCATGCATAGAGATTTGAAGCCCGAGAATTTTTTGTTCATTAATCATGAGGAAGACTCTCCCCTTAAGACCATTGATTTTGGACTCTCCGTGTTCTTTAGACCAGTGAAGACGATCTGTTTGTCTTCCCTTAAATGGACTGAGACTCGTGAAGGAAAGTCAGTTTCATCTTTTTCTAATTCAGATATGCAGAAGGAAGCTGCTCTTCTGATGCATAGATATATTGAGAAAATGTTCATAACTTCAGGTGAAACATTTACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTACGGAAGCACTATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATTTATATTTTGCTCAGTGGAGTTCCCCCATTTTGGGATGAAACGGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAGCTTGACTTTGTTTCTGAACCCTGGCCAAGCATATCTGACAGCGCAAAGGATCTTGTTCGAAGGATGCTTACGAGGGACCCTAAGAAGCGGCTGACAGCACATGAAGTTCTTTGTCACCCATGGGTTCAAGTCGGAGGTGTTGCTCCTGATAAACCACTGGATTCTGCTGTCTTGTCTCGTTTGAAACAGTTCTCTGCAATGAACAAGCTCAAAAAAATAGCTATTCGAGTAATTGCTGAAAGTCTGTCTGAGGAAGAAATAGGAGGACTGAAAGAAATGTTCAGGATGATAGACACAGATAATAGTGGACAGATCACTCTTGAGGAATTGAAAAATGGTTTGGAGAGAGTGGGTTCTGTTCTTAAGGATTCTGAAATTTCTTGGTTGATGCAAGCGTTTGATTTGTTGGAATATTGGAAAGACATTGATATATATTTTGCTTATGGCTACCATTACGTTGATAACAGTGGTACCATAGACTATGGTGAATTCATAGCAGCTATGCTACACCTAAACAAGATCCAGAAGGAGGATCATCTATATGCAGCATTCACATACTTTGACAAAGATGGGAGTGGATACATTACACCGGATGAGCTCCAACAAGCCTGCGAACAGTTTGGCCTACACGATTATCACCTGGATGAGATTATACGTGAAATTGACCAGGATAATGATGGACGCATTGATTACAGTGAGTTTGCAGCAATGATGCAAGACACTGGTTTTGGAAAAAAGGGAATTTAG 2385 0.4897 MPLAKQRARGSLKTTRGFGLRPRKQRNRGGQTFFTTVASSQRFQLHSVVQRNTPFNGKVREKVLWSCALDWPGSEGFADGRVGEGEREDGGGYGGAGVKTLTFDPRGDGILEFGNPKFEILNLEDRFPLEIDLGSGISRVREKLSTPMGNNCVGPNAGNGFIQSVTAAVWKTRPPEPHLTLPSGETKTSSPAPNAEKASERAPPRPADPPMPVQSTPPEPVKMPTVPVAKPLPLDHEKPASSHTEPVPAEKPKKPTHVKRVSSMGLQVDSVLGRKTENMKEFFSLGRKLGQGQFGTTFLCVQKGTNKDFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIVGAFEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLIVSVVEACHSLGVMHRDLKPENFLFINHEEDSPLKTIDFGLSVFFRPVKTICLSSLKWTETREGKSVSSFSNSDMQKEAALLMHRYIEKMFITSGETFTDVVGSPYYVAPEVLRKHYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFVSEPWPSISDSAKDLVRRMLTRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIGGLKEMFRMIDTDNSGQITLEELKNGLERVGSVLKDSEISWLMQAFDLLEYWKDIDIYFAYGYHYVDNSGTIDYGEFIAAMLHLNKIQKEDHLYAAFTYFDKDGSGYITPDELQQACEQFGLHDYHLDEIIREIDQDNDGRIDYSEFAAMMQDTGFGKKGI 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00199 794 ProSitePatterns EF-hand calcium-binding domain. 768 780 IPR018247 -
Spst7g00199 794 ProSiteProfiles EF-hand calcium-binding domain profile. 721 756 IPR002048 GO:0005509
Spst7g00199 794 FunFam Calcium-dependent protein kinase 1 596 788 - -
Spst7g00199 794 FunFam Calcium-dependent protein kinase 1 285 368 - -
Spst7g00199 794 ProSitePatterns EF-hand calcium-binding domain. 734 746 IPR018247 -
Spst7g00199 794 Pfam Protein kinase domain 284 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00199 794 Pfam Protein kinase domain 482 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00199 794 FunFam Calcium-dependent protein kinase SK5 498 593 - -
Spst7g00199 794 ProSitePatterns Protein kinases ATP-binding region signature. 289 316 IPR017441 GO:0005524
Spst7g00199 794 MobiDBLite consensus disorder prediction 204 227 - -
Spst7g00199 794 MobiDBLite consensus disorder prediction 236 257 - -
Spst7g00199 794 Gene3D Transferase(Phosphotransferase) domain 1 369 612 - -
Spst7g00199 794 MobiDBLite consensus disorder prediction 174 261 - -
Spst7g00199 794 PANTHER SERINE/THREONINE-PROTEIN KINASE 275 780 - -
Spst7g00199 794 CDD EFh 728 785 IPR002048 GO:0005509
Spst7g00199 794 ProSitePatterns EF-hand calcium-binding domain. 644 656 IPR018247 -
Spst7g00199 794 SUPERFAMILY EF-hand 617 785 IPR011992 -
Spst7g00199 794 ProSiteProfiles EF-hand calcium-binding domain profile. 631 666 IPR002048 GO:0005509
Spst7g00199 794 Pfam EF-hand domain pair 724 785 IPR002048 GO:0005509
Spst7g00199 794 ProSiteProfiles Protein kinase domain profile. 283 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00199 794 MobiDBLite consensus disorder prediction 1 29 - -
Spst7g00199 794 Gene3D - 613 789 - -
Spst7g00199 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Spst7g00199 794 ProSiteProfiles EF-hand calcium-binding domain profile. 759 790 IPR002048 GO:0005509
Spst7g00199 794 Pfam EF hand 636 662 IPR002048 GO:0005509
Spst7g00199 794 SMART serkin_6 283 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00199 794 Gene3D Phosphorylase Kinase; domain 1 285 368 - -
Spst7g00199 794 SMART efh_1 759 787 IPR002048 GO:0005509
Spst7g00199 794 SMART efh_1 725 753 IPR002048 GO:0005509
Spst7g00199 794 SMART efh_1 635 663 IPR002048 GO:0005509
Spst7g00199 794 SMART efh_1 680 717 IPR002048 GO:0005509
Spst7g00199 794 CDD STKc_CAMK 282 587 - -
Spst7g00199 794 SUPERFAMILY Protein kinase-like (PK-like) 283 589 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00199 Spst-Chr7 1470901 1478423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00199 148 794 EF-hand Containing Proteins AT2G38910 66.972 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst7g00199 Pkinase 4.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00199 K13412 - gmx:100813232 992.645