Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00173 ATGCAAACTGTTTACCTGAAAGGACATGAAGGACTTGTTCACAATTCTGTTGGCCAGTTGTCATCTGTAACTTCAGCTCCATGGTGGAGTGGCTTAGGATCTCAACCAGTTTATGGAGATTGTTGTGGCCAAATCAAGCCCTTTTCGTTGGAATATTCGAACTACGTCGACCAATTTGATGCTAGTAAACAAATGGTAAGAGGAGTTGAGCAATTTATGGATAAAGGACATGGAAACCAGTTTTCCATCTTTCCAGATGAATGTAGAATGTTGGGTAATGCACAACATCCTCAGGCAAACTTATCACTGCAGCCATCACTTGCTGAGCTCCCCAACCATTTCGATATCGGGTTTAATCAGCCAATGATCTGTGCACAATATCCTTGTATGGATCAGTTTTATGGGCTCATCTCCGCTTATGGACCTCAAATTTCGGGACGTGTAATGCTTCCGATCAACATGGCATCTGATGATGGACCAACATACGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCAGGCAGTCACGTGCTAAAGCTGTACTTGAAAATAAATTGATCAAACGTCGCAAGCCTTATATGCATGAATCGCGCCATCTACATGCAATGCGGCGACCAAGAGGATGTGGTGGTCGCTTCCTGACAAAAGGGTCTAGTAATGGAAATGGTGGAAATGTAAGCGAAGTGAATAAAACCGGTAGCCTGCAATTTCTGTCTAGTGCCTCTCAGTGTTCTGAAAAGGTGAAATCTAAGGTTGGAACTTTGAATTCACCAAAGGAGACAAATCAATGCAATCGAAACATCTCTTGTCCAGAAGTGAGAAGCATGTATAATCGGGGAGTTTTTGATGGCTTTTCTGTCAATCCTCTTGGATCTTCTGTCCATTCTATGGCAGACATGATAGGTAGTGAGCATGGTATCACCATGCCCACTAAATGGGTTGCAGCAGTGCCAAACAACTGA 966 0.4337 MQTVYLKGHEGLVHNSVGQLSSVTSAPWWSGLGSQPVYGDCCGQIKPFSLEYSNYVDQFDASKQMVRGVEQFMDKGHGNQFSIFPDECRMLGNAQHPQANLSLQPSLAELPNHFDIGFNQPMICAQYPCMDQFYGLISAYGPQISGRVMLPINMASDDGPTYVNAKQYHGIIRRRQSRAKAVLENKLIKRRKPYMHESRHLHAMRRPRGCGGRFLTKGSSNGNGGNVSEVNKTGSLQFLSSASQCSEKVKSKVGTLNSPKETNQCNRNISCPEVRSMYNRGVFDGFSVNPLGSSVHSMADMIGSEHGITMPTKWVAAVPNN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00173 321 ProSiteProfiles NF-YA/HAP2 family profile. 157 217 IPR001289 GO:0003700|GO:0006355
Spst7g00173 321 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 160 214 IPR001289 GO:0003700|GO:0006355
Spst7g00173 321 Gene3D - 157 218 - -
Spst7g00173 321 SMART cbf3 156 217 IPR001289 GO:0003700|GO:0006355
Spst7g00173 321 PRINTS CCAAT-binding transcription factor subunit B signature 191 214 IPR001289 GO:0003700|GO:0006355
Spst7g00173 321 PRINTS CCAAT-binding transcription factor subunit B signature 160 182 IPR001289 GO:0003700|GO:0006355
Spst7g00173 321 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 80 265 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00173 Spst-Chr7 1310852 1313793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00173 20 318 CCAAT-HAP2 Transcription Factor Family AT3G05690 39.937 1.78e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Spst7g00173 CBFB_NFYA 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00173 K08064 - gmx:100808195 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02651 1 34922553 34925539 Spst7g00173 7 1310852 1313793 PCT