Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00171 ATGGTGTTTGACAAGGCCATGATGGGTTCCAGGGAGGGATATATCACATGGGGTCTACTGAGGGACAAAGGATCACATGGTACTTTCTCAGGGGTCTCTCTCAAACCTTCTGCGATAATTGCCATCTCACACTTCTTTAAAAAAGATGATTGTCCTATTCAGACACAGTACTATACAACAATGAATCTATCATTCTTGAACCAACCTTCTTTCCAAGAGTTGTTGAGTCATGCTGAGGAGTGCCAAGCTGAAATCTCCGATGAGGTACCTTCCTTGCCATGGAAGGTGCAAAATAATAATGGAGTTAACATTAAGAATCAGTACAACCATGGGTTTCGTTTACCTGGTAGCAGAAAGAAATTATTTGCAGTCAATCAAGCATCTTCAAAAGCAGTGAATGCACCAAAGGGCTACCTTGCACTCTATGTTGGAGAGAAAATGAAGCGGTTCATGATCCCTGTGTCATACTTGAGCCAACCTTCGTTCCAAGACTTGTGGAGTCAAGCTGAGGAAGAGTTTGGATATGAGCACTCCATGGGTGGTCTCACAATTCCTTGCAGCGAAGATCTCTTCCAACGTATAACTTCTTGCTTGAATGGATAA 603 0.4279 MVFDKAMMGSREGYITWGLLRDKGSHGTFSGVSLKPSAIIAISHFFKKDDCPIQTQYYTTMNLSFLNQPSFQELLSHAEECQAEISDEVPSLPWKVQNNNGVNIKNQYNHGFRLPGSRKKLFAVNQASSKAVNAPKGYLALYVGEKMKRFMIPVSYLSQPSFQDLWSQAEEEFGYEHSMGGLTIPCSEDLFQRITSCLNG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00171 200 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 127 198 IPR003676 GO:0009733
Spst7g00171 200 Pfam Auxin responsive protein 118 198 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00171 Spst-Chr7 1302836 1307590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00171 126 198 Calmodulin-binding Proteins AT3G43120 45.205 2.97e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00171 - K14488 gmx:100820621 159.073