Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00157 ATGGCGATGGGACTGACACACATTTTGCCGTTGCTCCTTTTCTCCTTCTCGAGCGTCGTTTTAACCGAAACGGACCCGAACGATGTGGGGATTCTGAACAGTTTCCGAAGAGGATTGAAGAACAAAGAGCTCTTGCCGTGGCCGGAAGAAGGAGGAGACCCGTGTGGGAACCCTCCCTGGAAGTACATCTTCTGCAATGGCAACAGAGTCTCTCAGATTCAGACCAAAGACTTGGGCTTGGAGGGCCCGCTACCCTCCAACTTCAACAAGCTATCCATGTTGGAGAATCTGGGTCTGCAGAACAACAACCTGAACGGGCCTTTACCCTCCTTCAACGGCTTGTCAAACTTGAAATACGCGTTTCTGAACCGCAATGGGTTCGAATCCATCCCCGGAGATTTTTTCCAAGGGCTTCGGAGTCTCGAGGTGTTGGCTTTGGATTTCAATAATCTCAATGCCTCCTCTGGCGGCTGGGTGCTTCCTCAAACGTTGGAGGGTTCGGCGCAGTTGAGGAACATCTCTTGCATGAGCTGCAACCTGGTGGGCCCCATTCCCGCGTTTCTCGGCTCTTTGCCGTCGCTGGAGGTGCTGCAGCTCTCTGAGAACAACTTGACAGGGGAGATTCCGGCGACGTTGAACGCCGTTCCGGCGTTGCAAATTCTCTGGTTGAACAACCAGCGTGGTGACGGACTTTCCGGGAAAATCGACATTGTTGCGAGTATGGTTTCGTTGACTAGTTTGTGGCTTCACGGGAACAAATTTCACGGGAGTATTCCATTGAACATTGGGGATTTGGTTTCTCTGAGAGATTTGGATCTTAATGGAAACGAGTTGGTTGGGTTGATTCCACGTGGTTTGAGTGGGATGAAGTTGGAGCGGTTGGATTTGAATAATAACCACTTTATGGGTCCGATCCCTGTTTTTGCTGCGGATAAAGTGAGTTTTGAAAGCAATAACTTTTGCTTGTCGAAGACTGGGGTTATTTGTGCCTTTGAAGTGATGTTGCTGTTGGACTTTCTTGGGGGGTTGGGTTACCCGGGGATTTTGGTTGATTCGTGGATTGGGAATAATCCGTGTGATGGGCCATGGTTGGGGATAAAGTGCAATGGGGATGGAAAGGTGGAAATGATTATTTTGAGCAACTTTAATCTTACTGGTACTTTAAGTCCTTCTATTTCCAAGTTGGATTCTCTTGTTGAAATAAGGTTGGGAGGTAATGATATCAGTGGTAGTATACCCAGTAATTGGACTGGTTTGAGATCTTTAACATTGTTGGATCTGAGTGGTAATAACATTTCCCTTCCCTTGCCGAGGTTTGGGAAAGGGGTGAAGCTTGTGATTGACGGGAATCCTTCGTTAGGTGGTGCCCCAGAAGTTTCTCGTTCTCCACCAGGTTCTGGTTCTGATCCTAGTCCTAGGCCTGGTTCTGGTTCGTCATCTGGAAAGGTTGAACCTCCTTCATCTGATAAGCAGCATCCTTATCCATCTGAAGACTCTAGTCCCAATCCAAAGTCTGGTGGTATTTCTCTGGACTCAAATAATTCCGAAGGGAAAAGCTTGATTCCAATTGTGGCTCCTATTGCAGGTGTTGCAGCTGCGGCTTTTGTTCTCGTTCCGCTTTATTTGTATTGTTCCAGGAGGAGAAAAGGTGTCTCTGAGGGGGCAGGGTCTCTAGTGATTCACCCCAAAGATCCTTCTGAGTCGAACAATGTGCTTAAGGTTGTTATTGCTAACAACAGCAATGGGAATGTTTCCACAGTGACTGGCAGTGGGTCTGGGACTCTAAATCGAAGTGGGGAGTCTCATGTCATTGAATCTGGGAACCTTGTGATATCGGTTCAGGTTCTTCGAAATGTGACCAAGAATTTTGCCCGGGAGAATGAGCTTGGACGGGGTGGATTTGGGGTAGTTTACAAGGGCGAATTGGATGATGGGACTAATATCGCGGTGAAACGAATGGAATCGGGTGTTATTACCAGCAAAGCCTTGGATGAGTTCCAGTCTGAGATTGCAGTTCTATCGAAAGTCCGGCACCGGCATTTGGTATCTCTTTTGGGTTATTCAGTTGAAGGTAATGAGAGGATTCTGGTCTATGAGTATATGCCACAAGGGGCTCTCAGTATGCATCTGTTCCATTGGAAGAGTTCGCAACTGGAGCCACTCTCTTGGAAGAGGAGGCTCAATATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATAGTCTGGCACACCAGATCTTCATTCACAGAGATCTTAAATCATCAAATATTTTGCTTGGGGATGACTTTAGAGCAAAAGTCTCGGATTTTGGATTGGTAAAACTTGCTCCTGATGGCAAACAATCTGTGGTGACCCGGCTTGCTGGTACATTTGGATACTTGGCACCAGAATATGCAGTGACAGGAAAAGTCACCACCAAGGCAGATGTTTTCAGTTTCGGCGTTGTGCTAATGGAGCTGTTAACTGGATTAATGGCACTCGATGAGGATAGACCTGAGGAAAGCCAATACTTGGCATCGTGGTTCTGGCATATAAAATCAGACAAGGAGAAACTAATGGCTGCTGTTGACCCTGCCCTTGACATAAAGGAAGAAATGTTCAATATCGTTTCCATCATTGCCGAGTTGGCTGGGCACTGCACTGCCAGAGAACCAAACCAAAGGCCAGATATGAGTCATGTTGTGAATGTTCTTGGACCGCTGGTTGAGAAATGGAAACCATTAGATGATGACACTGAAGAGTATTCTGGCATAGACTATAGTCTTCCCCTTAACCAAATGGTGAAAGATTGGCAAGAGGCAGAAGGAAAGGAGTTGAGCTATGTGGACCTACAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGGTTTGCAGAGTCTTTCACTTCTGTTGATGGCCGGTGA 2910 0.4704 MAMGLTHILPLLLFSFSSVVLTETDPNDVGILNSFRRGLKNKELLPWPEEGGDPCGNPPWKYIFCNGNRVSQIQTKDLGLEGPLPSNFNKLSMLENLGLQNNNLNGPLPSFNGLSNLKYAFLNRNGFESIPGDFFQGLRSLEVLALDFNNLNASSGGWVLPQTLEGSAQLRNISCMSCNLVGPIPAFLGSLPSLEVLQLSENNLTGEIPATLNAVPALQILWLNNQRGDGLSGKIDIVASMVSLTSLWLHGNKFHGSIPLNIGDLVSLRDLDLNGNELVGLIPRGLSGMKLERLDLNNNHFMGPIPVFAADKVSFESNNFCLSKTGVICAFEVMLLLDFLGGLGYPGILVDSWIGNNPCDGPWLGIKCNGDGKVEMIILSNFNLTGTLSPSISKLDSLVEIRLGGNDISGSIPSNWTGLRSLTLLDLSGNNISLPLPRFGKGVKLVIDGNPSLGGAPEVSRSPPGSGSDPSPRPGSGSSSGKVEPPSSDKQHPYPSEDSSPNPKSGGISLDSNNSEGKSLIPIVAPIAGVAAAAFVLVPLYLYCSRRRKGVSEGAGSLVIHPKDPSESNNVLKVVIANNSNGNVSTVTGSGSGTLNRSGESHVIESGNLVISVQVLRNVTKNFARENELGRGGFGVVYKGELDDGTNIAVKRMESGVITSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMPQGALSMHLFHWKSSQLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKQSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEESQYLASWFWHIKSDKEKLMAAVDPALDIKEEMFNIVSIIAELAGHCTAREPNQRPDMSHVVNVLGPLVEKWKPLDDDTEEYSGIDYSLPLNQMVKDWQEAEGKELSYVDLQDSKSSIPARPTGFAESFTSVDGR 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00157 969 SUPERFAMILY Protein kinase-like (PK-like) 601 899 IPR011009 -
Spst7g00157 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Spst7g00157 969 FunFam receptor protein kinase TMK1 701 918 - -
Spst7g00157 969 MobiDBLite consensus disorder prediction 471 513 - -
Spst7g00157 969 ProSiteProfiles Protein kinase domain profile. 623 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00157 969 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Spst7g00157 969 Pfam Leucine rich repeat N-terminal domain 336 369 IPR013210 -
Spst7g00157 969 SUPERFAMILY L domain-like 56 443 - -
Spst7g00157 969 FunFam receptor protein kinase TMK1 585 700 - -
Spst7g00157 969 CDD STKc_IRAK 629 902 - -
Spst7g00157 969 ProSitePatterns Protein kinases ATP-binding region signature. 629 651 IPR017441 GO:0005524
Spst7g00157 969 FunFam Leucine-rich repeat receptor-like kinase 331 456 - -
Spst7g00157 969 Gene3D Ribonuclease Inhibitor 26 328 IPR032675 -
Spst7g00157 969 Pfam Protein tyrosine and serine/threonine kinase 626 899 IPR001245 GO:0004672|GO:0006468
Spst7g00157 969 Gene3D Ribonuclease Inhibitor 332 456 IPR032675 -
Spst7g00157 969 Gene3D Phosphorylase Kinase; domain 1 589 700 - -
Spst7g00157 969 MobiDBLite consensus disorder prediction 454 513 - -
Spst7g00157 969 FunFam Receptor-like kinase TMK4 26 326 - -
Spst7g00157 969 SMART serkin_6 623 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00157 969 PANTHER OSJNBA0070M12.3 PROTEIN 11 969 - -
Spst7g00157 969 SMART LRR_typ_2 419 442 IPR003591 -
Spst7g00157 969 SMART LRR_typ_2 265 288 IPR003591 -
Spst7g00157 969 SMART LRR_typ_2 241 264 IPR003591 -
Spst7g00157 969 SMART LRR_typ_2 191 215 IPR003591 -
Spst7g00157 969 SMART LRR_typ_2 138 167 IPR003591 -
Spst7g00157 969 SMART LRR_typ_2 114 137 IPR003591 -
Spst7g00157 969 Gene3D Transferase(Phosphotransferase) domain 1 701 919 - -
Spst7g00157 969 MobiDBLite consensus disorder prediction 949 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00157 Spst-Chr7 1166364 1169774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00157 60 899 Receptor kinase-like Gene Family AT5G65700 30.393 1.56e-85 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Spst7g00157 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00157 K00924 - gmx:100803759 1536.16