Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00133 ATGTCAACTTCCACAAGAAAACTAACCCTCAACACCGTCTCCGTCACCTTGGGCTGCGGCACCTGCAGAAGGCCCAAGCTTCTCCGCCACATATTCCACCCAAAACGTCGCCCCAAGAGGCCCACCTACCAAGCCCAAACAACCCATCACTGGGCCCATGACAGAGACGACACTACTACCACCGCCACCAGCACCACCAGCACCACCTTCTCTCCCTGCCACATCGACTCTTCCGCGCAGTTCTGCGACTACGCCAAGAGCGTGCGGGGGTTCGGGCGCGTGGGCAGCGAGGGCGTCGCGGTGGAGAAAGACTCCGACGACCCTTACTTGGACTTCCGACACTCCATGCTCCAGATGATACTCCAAAACGAGATTTACTCCAAAGACGATCTCAGAGAGCTTCTCAACTGTTTCCTCCAGCTCAATTCACCGGACCACCACGGTGTCATTGTCAGAGCCTTCACCGAGATCTGGAACGGCGTTTTCTCCGTCAGCTCCGGCGCCACCGCCTTCCACCGCAACCGTAAGTCTCGTGACTTCTAA 543 0.5764 MSTSTRKLTLNTVSVTLGCGTCRRPKLLRHIFHPKRRPKRPTYQAQTTHHWAHDRDDTTTTATSTTSTTFSPCHIDSSAQFCDYAKSVRGFGRVGSEGVAVEKDSDDPYLDFRHSMLQMILQNEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSVSSGATAFHRNRKSRDF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00133 180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Spst7g00133 180 NCBIfam uncharacterized plant-specific domain TIGR01568 99 159 IPR006458 -
Spst7g00133 180 ProSiteProfiles OVATE domain profile. 101 160 IPR006458 -
Spst7g00133 180 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 63 163 IPR038933 GO:0045892
Spst7g00133 180 MobiDBLite consensus disorder prediction 35 65 - -
Spst7g00133 180 Pfam Transcriptional repressor, ovate 105 161 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00133 Spst-Chr7 1012520 1013062 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst7g00133 Ovate 5.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00133 - - pvu:PHAVU_007G269800g 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00133 7 1012520 1013062 Spst7g00133 7 1012520 1013062 ECH