Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00125 ATGTTGCAGGATGTTATCCACCCCCCAACACCAGATGAGCAACTCCCCATTGATGAGATTTCAAGCCCAATCAGTGCTCGAATTTTCGAACTTTGCGACCCTGATTTTTTCCCAGATACACTGCAAAATTCTGAGGTTACCTCCAGCTCAAATTGTTGCCATGAAGACAAGTCCTCATATGCCACAACCATATCTCCTCCTTTAGACTTAGTAGACAGCAAGATCAATATCAATAGCAATAGCAACATAGTCACCACCTCATCTAGTACTACCACAGCCAGCACCACTACCAACAACAACATCAACAACAACACAACAAATAGCAATAACCTGTCTATCTTCTTTGACTCTCAAGATGAAATTGACAATGACATTTCAGCCTCCATAGACTTCTCATCATCTCCATCTTTTGTTGTTCCGCCACTTCTCCCAATCACAATTCAACAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACATGTGCAGCTATCAGCAGCAGGTTCAGTTTTGAAGGGCCTCTCTCAGTACCCTGCTGACCCTGTGGTGGCTCCTCTTATTGGGGCTCCATTAGCATCAGTTTTTGATGATGATTGCATCTCTTCCATCCCTTCTTATATGCCTCTCAACCCTTCTTCTCCCTCTTGCTCTTATCTCAGTCCTGGCATAGGAGTGTACATGCCCCCTCCTGGTTCCCTTACCACTGCCTTATCTTCTGACAGTTCTGGATTGTTTGGTGGGAACATGCTTCTGGGGTCTGAACTGCAGGCACAAGAACTGGACTACCAGGGAGAAAATGGTGGAATATATTGTACAGATTCAATTCAGAGGGTGTTTAATCCCCCAGACCTTCAGGCACTTGGTACTGAGAGTCAGAAACTTGTATCTGGAGCTGGGGGCTCTGCCACTTTGGCACCAGAAATTTCACACTTGGAGGACTCTACCTTGAAGGTTGGAAAACTTTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAACTTCAGCAAGAAAATCAAGTATGCTTGCCGTAAAACTTTGGCAGATAGCAGGCCCCGGGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGAGCCATAGACAAGGAAGTAGCAACCATGAAGAAGACGATGAAGAGATAATTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGGGTGAACTCTTTCAAATGCAACTATTCCATCCAATCCTTGATTTGA 1269 0.4397 MLQDVIHPPTPDEQLPIDEISSPISARIFELCDPDFFPDTLQNSEVTSSSNCCHEDKSSYATTISPPLDLVDSKININSNSNIVTTSSSTTTASTTTNNNINNNTTNSNNLSIFFDSQDEIDNDISASIDFSSSPSFVVPPLLPITIQQDQFDFSSAQPHVQLSAAGSVLKGLSQYPADPVVAPLIGAPLASVFDDDCISSIPSYMPLNPSSPSCSYLSPGIGVYMPPPGSLTTALSSDSSGLFGGNMLLGSELQAQELDYQGENGGIYCTDSIQRVFNPPDLQALGTESQKLVSGAGGSATLAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGESHRQGSSNHEEDDEEIIVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00125 422 MobiDBLite consensus disorder prediction 362 387 - -
Spst7g00125 422 Pfam CCT motif 325 367 IPR010402 GO:0005515
Spst7g00125 422 ProSiteProfiles CCT domain profile. 325 367 IPR010402 GO:0005515
Spst7g00125 422 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 143 383 IPR045281 GO:0009909
Spst7g00125 422 MobiDBLite consensus disorder prediction 362 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00125 Spst-Chr7 934477 938587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00125 304 374 C2C2-CO-like Transcription Factor Family AT5G24930 40.845 9.55e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst7g00125 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00125 - - gmx:100793417 674.085