Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00109 ATGACGCACTCCCCACCTGGCCACCTGCACGAGACCCCACAAAACCCTAATTTCCAAGACCCTACAAAAGCAGAGCTAGTTAAGACACTCTCAACAGCAATTCTGGCTAATCCTTGGTGGACTGGTCATCAGGTGGGGTTGGGTGCAGGGGTAGACCCTGCAACCAATTCACCATCTTCCACCTTAAACAAACTCCACATGGACCTTTCCATCAACGAAAGAAGCCTCGGCAGAGAAAGACAAGAGGAAGAGGAAGAAGATAGAGACAACGGTGATGAACCCAAAGAGGGTGCAGTTGAGGTTGGAACTCGCAGGCCAAGAGGGAGACCACCCGGGTCCAAAAACAAGCCCAAACCACCCATCTTCGTCACCAGGGACAGCCCAAACTCCCTCAGAAGCCATGTCATGGAGGTTGCCGGCGGCGCTGACGTGGCCGAAAGCGTAGCCCAGTTTGCTCGCCGCCGCCAGCGTGGCGTGTGTGTCCTCAGTGGGAGCGGTTCGGTGGCCAACGTCACTCTCCGGCAACCAGCGGCTCCGGGAGCGGTTGTGGCACTTCACGGAAGGTTTGAGATTCTATCCCTAAGCGGGGCGTTTTTACCTGGTCCTGCTCCGCCAGGCGCGACTGGACTCACTGTGTATCTGGCCGGAGGACAGGGCCAGGTAGTAGGAGGGAGTGTTGTAGGCTCCCTTGTAGCAGCTGGACCAGTTATGGTTATAGCTGCCACTTTTGCTAATGCTACCTATGAGAGGTTGCCACTTGAAGAGGAGGAAGACGATGGTGGTGGGGGCAGTGTGCAAGGAGGAAGTACTCTGGGAGGGTCTCCTCCTGGAATTGGAAGCAGTGGTGGCGGTGGGGGTGGTAGTGGTGGGGGCCACCTTCCAGGTGGGATTCCTGATCCTTCTTCTTTGCCTTTGTACAATCTCCCACCAAATCTTCTTTCCAATGGAGGAGGCCAAGTTGGGCATGAGGCTTTTGCTTGGGCTCATGGCCATGGAAGACCACCACCTTACTGA 1014 0.5592 MTHSPPGHLHETPQNPNFQDPTKAELVKTLSTAILANPWWTGHQVGLGAGVDPATNSPSSTLNKLHMDLSINERSLGRERQEEEEEDRDNGDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLSGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDDGGGGSVQGGSTLGGSPPGIGSSGGGGGGSGGGHLPGGIPDPSSLPLYNLPPNLLSNGGGQVGHEAFAWAHGHGRPPPY 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00109 337 MobiDBLite consensus disorder prediction 1 21 - -
Spst7g00109 337 MobiDBLite consensus disorder prediction 53 68 - -
Spst7g00109 337 MobiDBLite consensus disorder prediction 51 129 - -
Spst7g00109 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 256 - -
Spst7g00109 337 ProSiteProfiles PPC domain profile profile. 128 266 IPR005175 -
Spst7g00109 337 FunFam AT-hook motif nuclear-localized protein 131 258 - -
Spst7g00109 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 75 330 IPR014476 GO:0003680
Spst7g00109 337 CDD DUF296 132 215 IPR005175 -
Spst7g00109 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 244 IPR005175 -
Spst7g00109 337 Gene3D - 131 258 - -
Spst7g00109 337 MobiDBLite consensus disorder prediction 254 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00109 Spst-Chr7 832474 834453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00109 35 337 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.311 8.08e-105 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00109 - - gmx:102663643 334.724