Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00098 ATGAGTAGAAGTTATGAAAGTGTGTCTGGCAAAGGTGCAGTGCAGGAAGGAAGAAGAGTATATTATATGATGAGCGAAGAGGGTTCGAGGGGAAAGGCGAAGGAAGAAGAAGAGAATGTGAAGTACAGAGGAGTGCGTAGAAGGCCATGGGGAAAATATGCAGCAGAGATTCGTGACTCAATGAGACAAGGTCAAAGGTTGTGGCTGGGAACGTTCACCACAGCAGAGGAAGCTGCTAGAGCCTATGACAGAGCTGCATATGCCATGAGGGGTCCCTTTGCAGTCCTCAACTTCCCTCATGAATACCCTCCTTTACCACATGCTTCTTCTTCTTCTTCTTCTTCTGTCGATGTTTCTTCTTCAGCTTCATCTGTAGCCTCTTCAGGAAGAGGAAGAGAGAGGAGTGAGGAAGCACCTCAAGTTTTTGAGTTTGAGTGCTTTGATGACAAATTGTTGGAGGACCTTCTTGCTATTGAAGACAAAAATAAACATGGCAAAGATTGCACACATGAGTAG 516 0.4535 MSRSYESVSGKGAVQEGRRVYYMMSEEGSRGKAKEEEENVKYRGVRRRPWGKYAAEIRDSMRQGQRLWLGTFTTAEEAARAYDRAAYAMRGPFAVLNFPHEYPPLPHASSSSSSSVDVSSSASSVASSGRGRERSEEAPQVFEFECFDDKLLEDLLAIEDKNKHGKDCTHE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00098 171 Gene3D AP2/ERF domain 40 100 IPR036955 GO:0003700|GO:0006355
Spst7g00098 171 MobiDBLite consensus disorder prediction 104 138 - -
Spst7g00098 171 MobiDBLite consensus disorder prediction 106 129 - -
Spst7g00098 171 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Spst7g00098 171 ProSiteProfiles AP2/ERF domain profile. 41 99 IPR001471 GO:0003700|GO:0006355
Spst7g00098 171 FunFam Ethylene-responsive transcription factor 2 41 100 - -
Spst7g00098 171 PANTHER DNA-BINDING DOMAIN 32 160 IPR044808 GO:0003700|GO:0009873
Spst7g00098 171 SMART rav1_2 41 105 IPR001471 GO:0003700|GO:0006355
Spst7g00098 171 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Spst7g00098 171 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Spst7g00098 171 CDD AP2 41 100 IPR001471 GO:0003700|GO:0006355
Spst7g00098 171 SUPERFAMILY DNA-binding domain 41 101 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00098 Spst-Chr7 736856 742806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00098 36 163 AP2-EREBP Transcription Factor Family AT3G23230 53.488 6.21e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst7g00098 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00098 - - gmx:100781117 166.007