Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00097 ATGGATTGTTCTTCCATTCTCTATTCATCAAACTCGTCAGAGTCCTCATTGGGATCCCCTCATCACCACTTACCCTTTAACGAAAACGACCCCGAAGAGATGCTCCTCTACGGCATGATAACCTCACACCAAGAGAGAACTACCTCATGCAGAGTCATCATCAAAGAAGAAGAAGTTAATTCACAGCACAACAACAGCAACAGTAATGGTGTGAGTAAGAGCTTCCGCGGCGTGCGGAGGCGGCCATGGGGGAAGTTCGCGGCAGAGATAAGGGATTCCACCCGGCATGGGATAAGGGTGTGGCTGGGGACATTCGACAGCGCGGAGGCGGCGGCGCTGGCGTATGACCAAGCGGCGTTCGCCATGCGGGGCTCTGCGGCGGTGCTGAACTTCCCCGTGGAGAAGGTGAAGGAGTCACTGAGGGACTTGGATTGCTCTCTCTCTCAGCTTGAAGGGTGCTCTCCCGTTGTGGCCTTGAAGAGGAGACACTCCTTGGGACGCAAAATGGCCGCAAACAAGAAGAAGCGAGAGACTCATGAGAGTGATGGTGGTGGCGTTAGGGTAGATAACGTGGTTGTGTTGGAAGACTTGGGTGAAGAATATTTGGAACAGTTGTTGATGATGTCCTCCGATGATGCTAGATGTACTTGGTGA 654 0.5275 MDCSSILYSSNSSESSLGSPHHHLPFNENDPEEMLLYGMITSHQERTTSCRVIIKEEEVNSQHNNSNSNGVSKSFRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFAMRGSAAVLNFPVEKVKESLRDLDCSLSQLEGCSPVVALKRRHSLGRKMAANKKKRETHESDGGGVRVDNVVVLEDLGEEYLEQLLMMSSDDARCTW 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00097 217 FunFam Ethylene-responsive transcription factor 2 73 134 - -
Spst7g00097 217 CDD AP2 73 133 IPR001471 GO:0003700|GO:0006355
Spst7g00097 217 MobiDBLite consensus disorder prediction 1 22 - -
Spst7g00097 217 SUPERFAMILY DNA-binding domain 75 134 IPR016177 GO:0003677
Spst7g00097 217 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Spst7g00097 217 Gene3D AP2/ERF domain 73 134 IPR036955 GO:0003700|GO:0006355
Spst7g00097 217 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
Spst7g00097 217 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Spst7g00097 217 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Spst7g00097 217 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Spst7g00097 217 MobiDBLite consensus disorder prediction 1 25 - -
Spst7g00097 217 PANTHER DNA-BINDING DOMAIN 49 207 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00097 Spst-Chr7 728330 728983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00097 24 217 AP2-EREBP Transcription Factor Family AT3G23240 57.216 2.07e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst7g00097 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00097 K14516 - gmx:100780576 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03102 1 39646732 39647409 Spst7g00097 7 728330 728983 PCT