Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00077 ATGCATCCCAGAGATATCAAGCCTGACAACTTGCTGCTAGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCGCTAGACTGCAGTAATCTTCAAGAAAAGGACTTCTCTGTCGGAATTAACAGAAGCGGAGCCCTCCAAAGTGATGGCCGTCCAGTGGCTCCTAAACGAACACAACAGGAACAACTGCAGCATTGGCAGAAAAATCGACGAATGCTTGCCTATTCTACAGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTGCTGAAGAAAGGATATGGTGTGGAATGTGATTGGTGGTCTCTAGGAGCAATAATGTACGAAATGCTTGTGGGGTACCCACCCTTTTATTCAGATGAACCAATGTTGACATGTAGAAAGATAGTAAATTGGAGAACTAATTTGAAATTTCCAGAAGAAGCTAAACTTTCAGCCGAGGCAAAGGATCTTATTTGTAGACTCCTATGTAATGTGGAGCAGAGGCTTGGAACCAAAGGAGCCGATGAAATAAAGGCCCATCCATGGTTCAAAGGTATCGAATGGGACAAACTGTACAAAATGAAAGCTGCTTTCATACCTGAGGTCAATGATGAATTAGACACACAAAACTTTGAGAAGTTTGAAGAGGTAGACAAGCAAACTGTACCATCCTCAAAGGCAGGGCCCTGGAGAAAGATGCTGCCATCTAAAGATGTTAACTTTGTTGGTTACACATACAAGAATTTTGAAATCGTGAATGATCATGAAATACCAGGAATTGCTGAATTGAAGAAGAAAAGCACAAAACCTAAAAGACCATCTATTAAGGCCCTATTTGATGATGAGTCTGCTATGGCTGCCAATCAACCTATCAGAGGGAGCTTCTTAAACCTCTTACCTCCACAAATGGAAGTTCCTGAAAAAAGTGAATCACAATGA 933 0.4084 MHPRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSVGINRSGALQSDGRPVAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTNLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYKMKAAFIPEVNDELDTQNFEKFEEVDKQTVPSSKAGPWRKMLPSKDVNFVGYTYKNFEIVNDHEIPGIAELKKKSTKPKRPSIKALFDDESAMAANQPIRGSFLNLLPPQMEVPEKSESQ 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00077 310 SUPERFAMILY Protein kinase-like (PK-like) 4 231 IPR011009 -
Spst7g00077 310 ProSiteProfiles AGC-kinase C-terminal domain profile. 182 254 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst7g00077 310 SMART serkin_6 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00077 310 Gene3D Transferase(Phosphotransferase) domain 1 1 198 - -
Spst7g00077 310 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 231 - -
Spst7g00077 310 FunFam Non-specific serine/threonine protein kinase 80 199 - -
Spst7g00077 310 SMART pkinase_C_6 182 246 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst7g00077 310 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00077 310 Pfam Protein kinase domain 4 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00077 310 Pfam Protein kinase C terminal domain 200 244 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00077 Spst-Chr7 595964 601535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00077 4 304 AGC Kinase Gene Family AT4G14350 82.060 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Spst7g00077 Pkinase 6.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00077 K08790 - gmx:100795087 623.239