Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00055 ATGACCAACCATCTCTACAATGATGTGTTAAACTATGCACAGTTCCCTGAACCTTACAACAACACAGGCCCAAAAGGATGCAAGTTGTGCAGTCAAGTTTTCACTACCACTCAGGCCCTCCTAAACCATCTTGAATCTCACATGGCACAAGAAGAAGTTGCAATTAGAAGACTTTACTCCTCATCACAACATGTCAATTCTCAAAAGCAATTGGGTTCAAGTCAATTCCCACCACAACTTACTGTGGGTGATGGTAGGATCTTCCAACCACAACCACAACCTGGTATTATGCAGATGCCTCAGCCATTTATCAGAAACCCATTTTTCAATGTTAGCCAAATTGGTTCATCCTCATTACCAGCTAGGAAAATGCAAGTTCCACCACCAAAGGTTTTTCCTTGTGATGTAAGTACTAATGATGATGGGTCTAAGGCATATATCTTGAAGCTGGAGAAACCCATAAAGAAGATCGATTTCATTGATCTGGTGAATGTAGATGATGACAACAACTCAAACGTGGAAGAGGTAGATTTGGATCTAAAGCTCTAG 549 0.4098 MTNHLYNDVLNYAQFPEPYNNTGPKGCKLCSQVFTTTQALLNHLESHMAQEEVAIRRLYSSSQHVNSQKQLGSSQFPPQLTVGDGRIFQPQPQPGIMQMPQPFIRNPFFNVSQIGSSSLPARKMQVPPPKVFPCDVSTNDDGSKAYILKLEKPIKKIDFIDLVNVDDDNNSNVEEVDLDLKL 182
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00055 182 ProSitePatterns Zinc finger C2H2 type domain signature. 27 47 IPR013087 -
Spst7g00055 182 ProSiteProfiles Zinc finger C2H2 type domain profile. 25 52 IPR013087 -
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst7g00055 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00055 - K14816 pvu:PHAVU_007G277300g 183.341