Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00054 ATGACTAGTGTTAAGGACGTGGCCACTGGCTTATCATTGAAAGCTGCTTCTATGCTTCTACTTATGCAAGCAGAGGAAGTTTTTGATACTGTCCATGCTTTGAAAGAGATGGGGAGGACAGCCAAATGGCTTAGGAACTTGTTGACAGGGAAGAGAGACAGAGAAAAAGAGAAGGAAAAATGTGGTACCAACCTGTGTTTGTTAAATGGCACAACAGAAAATCCAACCACTCCTGCTTCAACAACAACAACCCCCAAGGAGAAGAGAAGGTGGAGTTTCAGGAGATCATCGGCTTCCAGGGAACTGAATCTTGCAGAATCTGGTGTCACTGCTTCAGTGACAGTGCAAACTGCCACCACATATGCTGGGAATGATCAAAGGAAACATGACATGGTGGTCGCTATGGCTCCTGCTACACCTGATACTGCTATCATCTGCTTCACTCCAAATTCCAATATATCATCAACAAGTATTGAAGAGGTTGCAGCCGTTACAATTCAGTCAGTGTTTCGGTCCTACTTGGCAAGAAAGGCACTTTGTGCTCTTAGAGGACTAGTTAAGTTGCAGGCACTGGTGAGGGGTCACTTGGTGAGAAAACAGGCCAGGGAGACACTGAGATGCATGCAGGCTTTGGTCATAGCACAAGCCAGGGCTCGTGCTCAGAGGGCAAGGATGGTGTCAGAAGGAAAGGTTGATCAAAAGCTTTCACCCTACAGAATAACCACAGAGGACAACTTCTTCATGCATATGTATAATGTGAGTCCAATAACAGCTGCCAACAAGCTTTCAAATTGTAGAATGATGGAAATGGACAGTGGTTTGGAGTTGGAAGAGAATGCCAAGATTGTTGAGATGTCTGTCTATGAACCAAAAGGTAACCCCAGAGGCAGAAACAGCACTGCGAATCGCGAACTTCCTGATCATAGATTTTCAGCATATTATTCATCAAATGGTTCATACTCAAAGGAGGAAAACTGCAATGCATCACCTGCACCATCAACACTGACAGAATTGAGTCCAAGAGCATGCAGTGGTCATTTTGAAGAGTGTTCCTTCAGCACAGCACAAAGTAGTCCCTATTACTACTCAGCAGTGTCAAGAGTGGATAACACAAAGCTACCTTTTGCCTTCCCTAAACCAGCCTACACAGAACCCATGTCCTATGACTACCCTTTGTTTCCAAACTACATGGCCAACACAGAATCATCAAGGGCCAAAGCCAGATCACAGAGTGCACCAAAAGCAAGGCCGGATTCGTTCGAGAGGCAGCCAAGCCGGAGAAGGCCTTCCATGGAAGGTAGAAATGTCCCAAGACCATTGAGGATGCAGAGGTCATCTTCACATGTTGGTGTCACTGCCCAAAACTACCAATATCCTTGGTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCTACAAGTACAAATGAGTGA 1440 0.4549 MTSVKDVATGLSLKAASMLLLMQAEEVFDTVHALKEMGRTAKWLRNLLTGKRDREKEKEKCGTNLCLLNGTTENPTTPASTTTTPKEKRRWSFRRSSASRELNLAESGVTASVTVQTATTYAGNDQRKHDMVVAMAPATPDTAIICFTPNSNISSTSIEEVAAVTIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQARETLRCMQALVIAQARARAQRARMVSEGKVDQKLSPYRITTEDNFFMHMYNVSPITAANKLSNCRMMEMDSGLELEENAKIVEMSVYEPKGNPRGRNSTANRELPDHRFSAYYSSNGSYSKEENCNASPAPSTLTELSPRACSGHFEECSFSTAQSSPYYYSAVSRVDNTKLPFAFPKPAYTEPMSYDYPLFPNYMANTESSRAKARSQSAPKARPDSFERQPSRRRPSMEGRNVPRPLRMQRSSSHVGVTAQNYQYPWSIKLDRSIVSECGSTSTNE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00054 479 ProSiteProfiles IQ motif profile. 159 187 IPR000048 GO:0005515
Spst7g00054 479 MobiDBLite consensus disorder prediction 401 448 - -
Spst7g00054 479 MobiDBLite consensus disorder prediction 419 434 - -
Spst7g00054 479 PANTHER IQ-DOMAIN 5-RELATED 37 433 - -
Spst7g00054 479 Gene3D - 158 210 - -
Spst7g00054 479 ProSiteProfiles IQ motif profile. 183 210 IPR000048 GO:0005515
Spst7g00054 479 Pfam Protein of unknown function (DUF4005) 374 433 IPR025064 -
Spst7g00054 479 SMART iq_5 158 180 IPR000048 GO:0005515
Spst7g00054 479 SMART iq_5 181 202 IPR000048 GO:0005515
Spst7g00054 479 MobiDBLite consensus disorder prediction 70 86 - -
Spst7g00054 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 204 IPR027417 -
Spst7g00054 479 MobiDBLite consensus disorder prediction 70 89 - -
Spst7g00054 479 Pfam IQ calmodulin-binding motif 186 202 IPR000048 GO:0005515
Spst7g00054 479 Pfam IQ calmodulin-binding motif 162 179 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00054 Spst-Chr7 435547 439708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00054 37 477 IQD Protein Family AT4G14750 44.130 8.97e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00054 - - pvu:PHAVU_007G277500g 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00054 7 435547 439708 Spst7g00054 7 435547 439708 ECH