Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00046 ATGAATCCTGTTGATGTTGGTCCTGTGGTTGTGAAAGAGGAGTTTCCTGGAGAAGGGGTGGTTGCTCCACAACCGCTTGAGGGACTTCATGAAAGTGGTCCTCCACCATTCCTCACAAAGACTTATGAAATCGTTGATGATGTTTCCACTGATGAGATAGTTTCATGGAGCAGAGGAAACAACAGCTTCGTTGTGTGGGATCCTCAGGCTTTTTCCATCACTCTTCTCCCGAGATACTTCAAACACAACAACTTCTCCAGTTTTGTCAGACAACTTAACACCTATGGGTTTAGAAAGGTGGATCCTGATAAATGGGAGTTTGCTAATGAAGGGTTTCTTAGAGGACAAAGGCATCTATTGAAGAACATAAGGAGGAGGAAGATCAATCATCAACCTCAGCCACCACAACAATCTCTGAACCCTTGTGTTGAATTAGGGAGGTTTGGATTAGATGGAGAAGTTGATGAGTTGAGACGTGACAAGCAAGTTCTGATGGTGGAGCTAGTGAAGCTTAGACAACAACAGCAGAACACAAGAAACCACCTTCAAGAAATGGAAAGTAGGCTCGAAAAGACTGAGCAGAAACAGCAACAGATGATGAAGTTCTTGGCAAGGGCAATGCAGAACCCCAACTTCTTGCAACGATTGGTTCAACAAAGGGAGTGGAGGGAGGAGTTGGAGGAAGTTCTTTCCAACAAGAAAAGAAGACCTATTGATCAAGGGCCTAGTGATGCTGAAGAATACTCAGGTTTGGTTAAACTTGAACAGGAGGAGTACAAATACAATGAGATACCAGAGTTTGACGTTTCTGACATGGAGCTTGTTATGAACATGGGGGAACAAATTGGAAGCCAAAAGAACACTTGTAATGAGGGGAAGAATGGAGGTGAACTTGAAAGTGGAAATGACATTGAGGAAGTACTCTGGAAAGAACTTCTAAATGAGGGTGTTGAAGAAGATCTACTAGCACTGGAGGATGATGATGACGACGACGATGAAGATATAAATGTGTTGGCTGATCAGGAACTTGGTTATTTAGCCTCAAATCCTAAATAA 1056 0.429 MNPVDVGPVVVKEEFPGEGVVAPQPLEGLHESGPPPFLTKTYEIVDDVSTDEIVSWSRGNNSFVVWDPQAFSITLLPRYFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLRGQRHLLKNIRRRKINHQPQPPQQSLNPCVELGRFGLDGEVDELRRDKQVLMVELVKLRQQQQNTRNHLQEMESRLEKTEQKQQQMMKFLARAMQNPNFLQRLVQQREWREELEEVLSNKKRRPIDQGPSDAEEYSGLVKLEQEEYKYNEIPEFDVSDMELVMNMGEQIGSQKNTCNEGKNGGELESGNDIEEVLWKELLNEGVEEDLLALEDDDDDDDEDINVLADQELGYLASNPK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00046 351 Pfam HSF-type DNA-binding 37 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst7g00046 351 Gene3D - 29 127 IPR036388 -
Spst7g00046 351 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst7g00046 351 PRINTS Heat shock factor (HSF) domain signature 37 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst7g00046 351 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst7g00046 351 Coils Coil 154 202 - -
Spst7g00046 351 SUPERFAMILY "Winged helix" DNA-binding domain 32 126 IPR036390 -
Spst7g00046 351 ProSitePatterns HSF-type DNA-binding domain signature. 76 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst7g00046 351 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 23 256 IPR027725 -
Spst7g00046 351 FunFam Heat shock transcription factor 1 30 127 - -
Spst7g00046 351 SMART hsfneu3 33 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00046 Spst-Chr7 389539 390877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00046 23 349 HSF AT3G22830 53.678 1.28e-128 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Spst7g00046 HSF_DNA-bind 8.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00046 K09419 - gmx:100806789 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00046 7 389539 390877 Spst7g00046 7 389539 390877 ECH