Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00039 ATGCCAGTGAGACAGATGAGGGAGAGCTCAGAACAACACCTTGTGATCAAGCCCCATTTGCAGAACCCCATGAATGGAGCTAAAAAGGTTCCTAGAGCTGTTCAAAATGGCAAAGGTCCACCACTGCCACAAGAACCCCACAACCAAACTTCAGCTCATGCAAGGAACAAGGGGAGAAGAAGGAGCAGAGGTGGCAAAAAATGTGACCGAGGAGATGTTTTGATGAGACCTATTGTGACAAGTTCTGTTGAAAATGGAAGCATCATGTGTGGTGAAATAGAGATGGGATACCCTACATCAAGCAAGTCTTTGAGCTTTGCTCCTAGGCCTGGCTATGGACAAGTTGGGACAAAGTGCATTGTCAAGGCTAACCATTTCTTTGCAGAGTTACCTGACAAGGACTTGAACCAGTATGATGTCAGTATTATCCCTGAAGTGTCTTCCAAAGCTGTGAACAGGTCCATAATAGCAGAACTCGTGAGGCTCTATAAGGAGTCTGACCTTGGGATGAGACTTCCAGCATATGATGGCAGAAAAAGTCTGTACACTGCCGGGCCACTTCCCTTTTCCTGGAGAGAGTTTAAGATAAAGGTTATGGATGATGAGGATGGAGTTAATGGCCCCAAAAGGGAAAGAGAATATAGAGTGGTGATCAAGTTTGTTGCTAGGGCAAATTTGCATCACCTGGGCCAGTTTCTAGCTGGTAAACGGGCTGATGCTCCACAACAGGCACTCCAAATTTTTGACATTGTATTACGAGAGCTATCATCTAAGAGGTTCTGCCCAGTTGGGAGATCCTTCTTTTCACCTGATATCAGAACACCACAACGGCTTGGGGAAGGTTTGGAGTCGTGGTGTGGGTTTTACCAAAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAACATTGATATGGCTTCTGCTGCATACATAGAACCTCTTCCTGTTGTGGAATATGTTGGCCAGCTATTAGGAAAAGATATCCTGTCCACTCAATTGTCCGATGCTGATCGCATAAAAATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACCCACAGAGGGAGTGTTAGAAGAAAGTACCGAGTTTCTGGTTTGACTTCTCAACCGACCAGAGAACTTGTGTTTCCTGTTGATGAGAACTCAACTATGAAGTCAGTAGTTGAATATTTCCAAGAGATGTATGGTTTCACTATTAAATATACTCATCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAAGCAAATTATTTACCAATGGAGGCCTGCAAAATTGTTGAGGGACAACGATACACGAAAAGGTTGAATGAGAAGCAAATCACTGCTCTCCTAAAAGTTACTTGTCAAAGACCTCGTGACCGAGAGAGTGACATTTTGCGGACCATTCAGCACAATGCTTATGATCAAGATCCTTATGCAAAGGAATTTGGGATTAAAATAAGTGAAAAGCTAGCTTCGGTAGAAGCGCGAATTCTCCCTGCCCCATGGCTTAAATATCATGAAAGCGGGAAAGAAAAGAATTGTTTACCCCAAGTAGGTCAATGGAATATGATGAACAAGAAAATGATAAATGGGATGACTGTCAGCCGGTGGGCATGCATAAATTTTTCAAGAACCGTACAAGACAGTGTTGCTCGCACTTTTTGTGCCGAACTAGCTCAAATGTGCCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCATCTACAATGCCAAACCTGAGCATGTGGAGAAAGCTTTGAAACATGTTTACCATGTGTCTACAAACAAAACCAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCTGACAACAATGGTTCTCTCTATGGTGATCTAAAGCGTATTTGTGAAACTGACCTTGGTTTAATTTCTCAATGTTGTCTGACAAAGCATGTCTTTAAGATAACTAAGCAGTACCTGGCTAATGTGTCTTTGAAAATCAATGTCAAGATGGGAGGTAGAAACACTGTTTTGGTTGATGCTGTAAGCTGTAGAATACCATTGGTTAGTGACATACCAACTATAATATTTGGAGCAGATGTTACCCACCCTGAAAATGGAGAAGACTCCAGCCCTTCAATTGCAGCTGTAGTAGCATCTCAAGACTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGTGCTCAGGCTCATAGGCAGGAACTTATACAAGACTTGTACAAAATGTGGCATGACCCTGTTCGTGGCTTAGTCAGTGGTGGCATGATCCGTGATTTGTTGATTTCCTTTAGAAAGGCAACAGGACAGAAGCCTCTACGGATTATATTTTATAGGGATGGTGTAAGTGAAGGGCAATTTTACCAAGTTCTACTTTACGAGTTGGATGCAATTCGGAAGGCATGTGCTTCTTTAGAACCAAATTATCAACCTCCAGTAACTTTCATAGTTGTACAAAAAAGACACCATACTCGGTTGTTTGCAAATAACCACAGGGACAGGAATAGTACTGATAAGAGTGGAAATATATTGCCTGGGACTGTTGTGGATTCTAAAATCTGTCATCCAACAGAATTTGATTTTTACCTCTGCAGTCATGCTGGTATCCAGGGAACGAGTCGTCCAGCTCATTATCATGTTTTATGGGATGAAAACAACTTTACAGCAGATGGAATCCAATCTTTGACAAACAATCTATGTTACACATATGCCAGGTGTACACGCTCTGTATCTGTTGTTCCTCCAGCATATTATGCACACTTGGCAGCTTTTCGAGCTCGGTTCTACATGGAACCAGACCTGCAGGAAAATGGCTCCTCAGGTGGAGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCACCAAGACAACAAGGGCAGGTGGAGAGTGTGGTGGGGTGAAGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTAATGTTTTACTGTTAG 2928 0.4293 MPVRQMRESSEQHLVIKPHLQNPMNGAKKVPRAVQNGKGPPLPQEPHNQTSAHARNKGRRRSRGGKKCDRGDVLMRPIVTSSVENGSIMCGEIEMGYPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVSIIPEVSSKAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGPLPFSWREFKIKVMDDEDGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQQALQIFDIVLRELSSKRFCPVGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAYIEPLPVVEYVGQLLGKDILSTQLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRESDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRTVQDSVARTFCAELAQMCQVSGMEFNPEPVIPIYNAKPEHVEKALKHVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKMWHDPVRGLVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSSGGGGGGGGGGGGGTKTTRAGGECGGVKPLPALKENVKRVMFYC 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00039 975 ProSiteProfiles Piwi domain profile. 602 923 IPR003165 GO:0003676
Spst7g00039 975 FunFam protein argonaute 10-like 671 975 - -
Spst7g00039 975 Gene3D paz domain 313 431 - -
Spst7g00039 975 Pfam Argonaute linker 2 domain 454 500 IPR032472 -
Spst7g00039 975 MobiDBLite consensus disorder prediction 927 952 - -
Spst7g00039 975 SUPERFAMILY PAZ domain 308 468 IPR036085 GO:0005515
Spst7g00039 975 Gene3D - 492 665 - -
Spst7g00039 975 ProSiteProfiles PAZ domain profile. 314 428 IPR003100 GO:0005515
Spst7g00039 975 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 100 923 - -
Spst7g00039 975 SMART PAZ_2_a_3 318 450 IPR003100 GO:0005515
Spst7g00039 975 Pfam N-terminal domain of argonaute 118 252 IPR032474 -
Spst7g00039 975 CDD Piwi_ago-like 472 922 IPR045246 -
Spst7g00039 975 SMART Piwi_a_2 602 923 IPR003165 GO:0003676
Spst7g00039 975 Pfam Piwi domain 603 922 IPR003165 GO:0003676
Spst7g00039 975 Pfam Argonaute linker 1 domain 262 310 IPR014811 -
Spst7g00039 975 MobiDBLite consensus disorder prediction 1 70 - -
Spst7g00039 975 SMART DUF1785_2 261 313 IPR014811 -
Spst7g00039 975 Pfam Mid domain of argonaute 511 588 IPR032473 -
Spst7g00039 975 Gene3D - 671 975 IPR036397 GO:0003676
Spst7g00039 975 Pfam PAZ domain 340 444 IPR003100 GO:0005515
Spst7g00039 975 SUPERFAMILY Ribonuclease H-like 594 924 IPR012337 -
Spst7g00039 975 FunFam Argonaute 10 492 665 - -
Spst7g00039 975 CDD PAZ_argonaute_like 313 427 - -
Spst7g00039 975 FunFam Protein argonaute-2 307 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00039 Spst-Chr7 348622 355450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00039 1 975 Eukaryotic Initiation Factors Gene Family AT5G43810 80.338 0.0 1643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00039 K11593 - gmx:100819073 1863.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00039 7 348622 355450 Spst7g00039 7 348622 355450 ECH