Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00013 ATGGCACCCCTCAAACTGCATCACTTAATCTTTCCCATCTTCATCTTCATCTTCTTCCCACCTTCTTCCCACGCCCAAACCCCACGTCAGCAGAACAACACGGGCTTCAAGTGCACCGGCACCCGCACGTGCGCCGCCTACGCCTTCTACCGTGCCTCCGCTCCCAACTTCCTCGACCTGGCCGCCGTCGGCGACCTCTTTGAGGTGAGCCGCCTCATGATATCCACTCCGAGCAACATCTCCTCCGTGTCCTCCCCCCTTGTCCAAAACCAGCCCCTCTTCGTCCCCTTGACCTGCTCCTGCAACCCCGTCAACGCCACCTTCGGCTCCCTCTCCTACGCCAACATCTCCTACACCATCCAACCCAACGACACCTTCTACATCGTCTCCACCTTCAAGTTCAACAACCTCACCACCTACCCTTCCGTCGAAACCGTCAACCCCACCTTAGTCGCCACCGGCCTCTCCATCGGCCAGGTCACCATTTTCCCTGTCTTCTGCAAATGTCCCGACACCAACAACACCAATTACATGATATCGTACGTTGTTCAACCCGAGGACAACATCTCCTCCATTGCTTCAGCTTTTGGGGTTAAGGAACAAGCTATAATTGACGTGAATAATGACACACTGTATGATTATGACACGATTTTCATTCCAGTGGCGCAGCTTCCGGTTCTTTCGCAGCCAGCGGTGGCTCCAGCTGCTCCGCCGAGTGGGAATGGGAGGGATAGGACGGGGACTGTTAGAGGGTTGGCGATTGGGTTGGGGGTGGTGGGGTTGTTGTTGGTGTTGGTGTTGGTGAGCGGTGTATGGGTGTGGAGAGAGCTTGTGCTGAAGAAGAGTTTGGGGATGAAGGATGAGGAGGAGGGAGGGAAGAAGAACGTGTATTTGGGAGGGAAAGAGGGTGAGAAAGGTGGTTTGGATGTGAAACTGATGGCAAATGTGTCGGATTGTTTGGACAAGTATAGAGTTTTTGGGGTTGAGGAACTGGTGGAGGCCACAGATGGGTTTGATGGGAGGTCCTTGATTGAGGGGTCGGTGTACAGAGGGAAGATTGATGGGGGGGTTTTTGCCATCAAGAAGATGAAGTGGAATGCCTATGAGGAACTCAAGATCTTGCAGAAGGTAAACCATGGGAATCTGGTGAAGTTGGAGGGATTCTGCATAGATCCAGAAGAAGCAAACTGCTATCTAGTCTATGAATATGTGGAGAATGGATCTCTATACTCGTGGTTGCATGAGGAGAAAAAGGAAAAGCTGAACTGGAAAACAAGACTACGAATAGCAATTGACATTGCCAATGGCCTCCAATACATCCACGAGCACACAAGGCCACGAGTTGTGCACAAAGACATCAAGAGCAGCAACATTCTCTTGGACTCCAACAAAAGAGCCAAAATTGCAAATTTTGGGCTTGCAAAGTCTGGAATGAATGCCATCACCATGCACATTGTAGGAACACAAGGTTACATTGCCCCTGAATATCTGGCTGATGGTGTGGTCTCCACAAAGATGGATGTGTTCTCTTTTGGGGTTGTGTTGCTTGAACTAATTTCTGGGAAGGAAGTCATTGATGAGGAGGGAAATCTCTTGTGGGCAAGTGCCACCAGAACCTTTGAAGTGGACAGTGAGCAAGAGAAGGTAAGGAGACTGAAGGAATGGTTGGATAAGGATATTTTAAGGGAGACATGCTCAATGGAAAGTTTGATGGGTGTTCTCACAGTTGCAATTGCTTGCTTGCATAAAGACCAGTCAAAGAGGCCCAGCATAATCGACATTGCCTATGCACTATCTAAAAGCGAAGATTTGGGCTTTGACATCTCAGATGACGGGATTGGTTCACCACGGGTGGTGGCTAGGTGA 1866 0.5016 MAPLKLHHLIFPIFIFIFFPPSSHAQTPRQQNNTGFKCTGTRTCAAYAFYRASAPNFLDLAAVGDLFEVSRLMISTPSNISSVSSPLVQNQPLFVPLTCSCNPVNATFGSLSYANISYTIQPNDTFYIVSTFKFNNLTTYPSVETVNPTLVATGLSIGQVTIFPVFCKCPDTNNTNYMISYVVQPEDNISSIASAFGVKEQAIIDVNNDTLYDYDTIFIPVAQLPVLSQPAVAPAAPPSGNGRDRTGTVRGLAIGLGVVGLLLVLVLVSGVWVWRELVLKKSLGMKDEEEGGKKNVYLGGKEGEKGGLDVKLMANVSDCLDKYRVFGVEELVEATDGFDGRSLIEGSVYRGKIDGGVFAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDPEEANCYLVYEYVENGSLYSWLHEEKKEKLNWKTRLRIAIDIANGLQYIHEHTRPRVVHKDIKSSNILLDSNKRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEVIDEEGNLLWASATRTFEVDSEQEKVRRLKEWLDKDILRETCSMESLMGVLTVAIACLHKDQSKRPSIIDIAYALSKSEDLGFDISDDGIGSPRVVAR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00013 621 Gene3D Transferase(Phosphotransferase) domain 1 404 608 - -
Spst7g00013 621 SUPERFAMILY Protein kinase-like (PK-like) 329 597 IPR011009 -
Spst7g00013 621 ProSiteProfiles Protein kinase domain profile. 328 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00013 621 SMART LysM_2 180 220 IPR018392 -
Spst7g00013 621 SMART LysM_2 117 164 IPR018392 -
Spst7g00013 621 Gene3D Phosphorylase Kinase; domain 1 308 403 - -
Spst7g00013 621 Pfam Protein kinase domain 360 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00013 621 Pfam LysM domain 181 219 IPR018392 -
Spst7g00013 621 Gene3D LysM domain 178 220 IPR036779 -
Spst7g00013 621 ProSiteProfiles LysM domain profile. 179 226 IPR018392 -
Spst7g00013 621 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 600 - -
Spst7g00013 621 FunFam PTI1-like tyrosine-protein kinase 3 404 604 - -
Spst7g00013 621 CDD LysM 179 219 IPR018392 -
Spst7g00013 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Spst7g00013 621 SMART serkin_6 338 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00013 Spst-Chr7 213347 216354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00013 11 600 Receptor kinase-like Gene Family AT2G23770 34.069 2.30e-85 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst7g00013 Pkinase 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00013 - - gmx:100802872 920.228