Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00008 ATGGATCGATTTTTTCCTGAGAAACTTCTGGGTGAGATATTCTGGGATCAATCTCTTTTGGCCACCGACCAAAGTGATGCAGTTAAAAATTCCCAAATCATCAAGGGTGAAGCTTTCCCTCCTGCAACTCAAAGTGCTTTTGTTCAATATAGAGACCTACCCAGAAGCAAAAACCCTCTAAACGGGTCAAATTCAGAGAGCATGAGTAAGAGAATGCTGGCGTTCTTGAGAAAAAGTTTCCCCGTGGAGAGAAATAACGTGGAAGAGAATGAAAGGGATCGCAATTTCAGGCACATGATCAATGAGAGAATGAGGAGACGGAGGCAGAGGCAGTGCTGCTTGGCCCTGCATTCAATTTTACCACATGGAACCAAAACAGATAATAATTCTGTAATTCAAATGGCAGCGAAGGAGATTGTACGGCTACAAGGATGCAGAGAAGAGTTGAAGAGGAAAATTGAAGGAAATGTTGAAGGTGTTGCTGGGAGGAAGCATGATGGGAGAAGTAAGGTTGAATATTTGAGAGTTGGAGATCCAAAGTGTGCCATTGATTCAATGGTTGAGAGGCTGAAGTTGTTGAAAAAGGAAGGATCGGATAGCAGCAGCATCAGAGCAAGTTTCTCCCCAGTGGAGTTGTTTGCAGTGTTAGAGATAGACAGTGTTGTTTGCAGGGCCAGAACAGATATCTAA 690 0.4333 MDRFFPEKLLGEIFWDQSLLATDQSDAVKNSQIIKGEAFPPATQSAFVQYRDLPRSKNPLNGSNSESMSKRMLAFLRKSFPVERNNVEENERDRNFRHMINERMRRRRQRQCCLALHSILPHGTKTDNNSVIQMAAKEIVRLQGCREELKRKIEGNVEGVAGRKHDGRSKVEYLRVGDPKCAIDSMVERLKLLKKEGSDSSSIRASFSPVELFAVLEIDSVVCRARTDI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00008 229 Pfam Helix-loop-helix DNA-binding domain 97 143 IPR011598 GO:0046983
Spst7g00008 229 Coils Coil 132 152 - -
Spst7g00008 229 Gene3D - 83 157 IPR036638 GO:0046983
Spst7g00008 229 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 155 IPR036638 GO:0046983
Spst7g00008 229 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
Spst7g00008 229 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 226 IPR044658 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00008 1 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 35.776 3.45e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00008 - - pvu:PHAVU_007G280700g 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00008 7 190206 191098 Spst7g00008 7 190206 191098 ECH