Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00006 ATGGACACATCTCTGGTGTTTTCAGTGCGGAGGCGCGAGGCAGAGCTGATAGCTCCGGCGCAGGCGACTCCTCGCGAAGTGAAGCTACTGTCAGACATAGATGACCAAGATGGGTTAAGGTTTCAGATTCCGGTGATCCAGTTCTACCGGTATGATCCATCGCAAGCGGGGAGAGACCCTGTTGGGGCTATCAGAGAGGCTTTGGCCAAAACGCTTGTGTTTTACTATCCCTTTGCAGGTAGGCTGAGGGAAGGGCCTGGTCGGAAACTCGTGGTGGATTGCACAGGGGAAGGTGTTCTTTTCATTGAAGCTGATGCAGATGTCACGCTCAAGCAGTTCGGTCACTCTCTTCAACCTCCTTTCCCCTGCTGGGAGAATCTTCTTTACGATGTTCCTGCCTCTCAAGGAGTTCTTCACACTCCCCTCCTCCTCGTACAGGTGACGCGGCTGAAGTGTGGGGGTTTCATATTTGCACTTCGTCTGAACCACACGATGAGCGACGCAGCGGGTCTGGTCCAGTTCATGAATGCGGTGGGCGAGATAGCCCGAGGGAGGAAGGAGCCGTCAGTCCCGCCGGTGTGGCGGAGAGAGCTTCTCAACGCGCGGGACCCACCACGAGTCACGTGCACCCACCGAGAGTATGATGACGTCCCCGACACCAAAGGGACCATCATCCCCTTGGACGACATGGCGCACCGCTCCTTCTTCTTCGGCCCCACCGAGTTCTCGGCCATCCGCCGCCTTCTCCCCCCTCACCAAAAAAAATGCTCCAACTTCGAAGTCCTTACCGCATGCCTCTGGCGCTGCCGCACCCTGGCGCTGCAACCCGACAGAGACGAGGAGGTTCGCATTATCTGCATAGTGAACGCACGCGCCAAGTTCAACCCTCCTCTACCAGAAGGATACTACGGCAACGCTTTTGCGTTTTCCGTGGCGGTTACAACTGCGGGGAAGTTATGCGAGAATCCATTGGGATATGGTTTGGAGTTGGTGAGGAAGGCGAAGGCTGATGTGAACGAGGAGTACATGCACTCGGTGGCAGATTTGATGGTTACGAAAGGACGCCCTCACTTCACGGTGGTGAGGTCGTATCTGGTGTCGGATGTTACACGTGCGGGGTTCGGTGACGTTGACTTTGGGTGGGGGAAAGCTTTTTATGGGGGACCGGCGAAGGGAGGTGTTGGAGCCATTCCTGGTGTGGCAAGCTTTTACATACCCTTCACTGATGTTAATGGAGAAGAAGGGTTGGTTATGCCCGTTTGTTTACCCTCTGAGGCCATGCAGAGGTTTCGGATGGAGTTGGACTCTGTCCTTAACAACCAAACCCAGCCTACTTCAAACTCCAAGTTCATTGTTTCTTCCTTATAG 1368 0.549 MDTSLVFSVRRREAELIAPAQATPREVKLLSDIDDQDGLRFQIPVIQFYRYDPSQAGRDPVGAIREALAKTLVFYYPFAGRLREGPGRKLVVDCTGEGVLFIEADADVTLKQFGHSLQPPFPCWENLLYDVPASQGVLHTPLLLVQVTRLKCGGFIFALRLNHTMSDAAGLVQFMNAVGEIARGRKEPSVPPVWRRELLNARDPPRVTCTHREYDDVPDTKGTIIPLDDMAHRSFFFGPTEFSAIRRLLPPHQKKCSNFEVLTACLWRCRTLALQPDRDEEVRIICIVNARAKFNPPLPEGYYGNAFAFSVAVTTAGKLCENPLGYGLELVRKAKADVNEEYMHSVADLMVTKGRPHFTVVRSYLVSDVTRAGFGDVDFGWGKAFYGGPAKGGVGAIPGVASFYIPFTDVNGEEGLVMPVCLPSEAMQRFRMELDSVLNNQTQPTSNSKFIVSSL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00006 455 Gene3D - 5 216 IPR023213 -
Spst7g00006 455 Gene3D - 219 433 IPR023213 -
Spst7g00006 455 PANTHER ACYL TRANSFERASE 4 7 437 - -
Spst7g00006 455 Pfam Transferase family 8 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00006 Spst-Chr7 171188 172872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00006 9 431 Monolignol Biosynthesis Gene Families AT5G48930 29.705 1.84e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00006 K19861 - gmx:100797017 800.045