Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02759 ATGCAGGTGCGGTTGATCGGATATAGCATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAAAATGGAAACCTAAGTCAACATCTGCGTGGTTCAGGTAGTAGAGAACCACTACCATGGGCTACTCGTGTGCAGATTGCTTTGGATTCTGCCAGAGGCCTTGAATATATTCACGAGCATACAGTACCTGTATATATTCATCGTGACATAAAGTCAGCAAATATATTAATAGACAAAAACTTCCGGGGCAAGGTTGCTGATTTTGGACTGACCAAACTCACAGAAGTTGGAAGTTCATCACTTCCCACTGGTCGTCTTGTTGGAACATTTGGATACATGCCACCGGAGTATGCTCAATACGGGGATGTTTCTCCCAAAGTAGACGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCGGCTAAGGAAGCAATTGTCAAGACAACCGATTCTGTTGTCGACTCAAAGGGCCTCGTAGCTTTGTTTGATGGAGTGCTTGGCCAACCGGATCCCACGGAAGATCTCCGCAAATTAGTTGATCCAAGGCTTGGGGATAACTACCCAATTGATTCTGTCCGCAAGATGGCACAACTAGCCAAAGCATGTACCCAAGACAATCCCCAACTCCGTCCAAGTATGAGGTCTATCGTGGTTGCTCTGATGACACTTTCTTCAACAACAGACGATTGGGATGTTGGCTCCTTCTATGAAAATCAAAATCTTGTCAATCTTATGTCAGGAAGATAG 753 0.4396 MQVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGSREPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTTDSVVDSKGLVALFDGVLGQPDPTEDLRKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02759 250 SUPERFAMILY Protein kinase-like (PK-like) 3 230 IPR011009 -
Spst6g02759 250 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02759 250 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 3 236 IPR044812 GO:0019199|GO:0045087
Spst6g02759 250 Pfam Protein kinase domain 11 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02759 250 PIRSF ILK 9 238 - -
Spst6g02759 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 66 78 IPR008271 GO:0004672|GO:0006468
Spst6g02759 250 SMART serkin_6 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02759 250 Gene3D Transferase(Phosphotransferase) domain 1 2 244 - -
Spst6g02759 250 FunFam PTI1-like tyrosine-protein kinase 3 21 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02759 Spst-Chr6 103804636 103806510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02759 3 250 Receptor kinase-like Gene Family AT3G21630 72.581 8.02e-123 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst6g02759 Pkinase 5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02759 K13429 - gmx:100777781 484.567