Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02734 ATGGCTATGGCAGCCCCAGGACAACTCAACGTGAACGAGTCACCCTCGTGGGGGTCCCGAAGCGTTGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACGTATGGAAGTGTGATGTGTCAGGTTTACATGGCTAGAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAGATTCGAATGGACAATGAGAGAGAAGGATTTCCTATAACAGCTATTCGAGAAATAAAAATTCTAAAGAAACTACACCATGAAAATGTAATTAAGTTGAAAGAAGTTGTGACTTCTCCAGACGGTAACAAATATAAAGGTGGCATCTACATGGTCTTTGAATACATGGACCATGATTTGACAGGTCTTGCTGACCGACCAGGGATGAGATTTACAGTTCCCCAAATCAAGTGTTACATGAGACAGCTTCTGACCGGGCTGCATTACTGTCACGTAAATCAAGTACTTCACCGAGATATCAAAGGTTCAAATCTTCTCATAGATAATGAAGGTAATCTGAAACTTGCTGATTTTGGATTGGCACGGTCATTTTCTAACGAGCACAATGCAAATCTTACAAATCGTGTCATCACATTATGGTACAGACCCCCTGAGCTGCTGCTTGGGACAACAAGGTATGGGCCAGCTGTAGATATGTGGTCTGTGGGGTGCATCTTCGCAGAGCTTCTTCATGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAATAAGATTTTTGAGCTATGTGGAGCACCAGATGAAGTGAACTGGCCTGGTGTTTCGAAGACTCCCTGGTATAATCAGTTTAAGCCAACAAGACCAATGAAAAGACGTCTCCGGGAAGTTTTCAGACATTTTGATCGGCATGCTCTGGAATTGTTGGAGAAGATGCTGACACTTGATCCTGCTCAGAGAATTACTGCTAAGGATGCACTTGATGCTGAATATTTCTGGACTGATCCATTACCATGTGATCCTAAGAGTTTACCCAAATATGAGTCATCACATGAGTTCCAGACCAAGAAAAAGCGCCACCAGCCACGACAAAACGAAGAAAATGCCAAACGTCTTAAAATGCAGCATCCTCAACAGCACACACGCCTGCCCCCAATTCAGCAGACTGGGCAACAGCAACCTCAAATGCGGCAAGGTCCTAACCACCCTATTCATGGGTCTCAACCAGCAGTTGCTGCAGGACCTAGCCATCACTATGGGAAGCCTCGAGGTCCCTCTGGTGGGCCTGGAAGATATCCTCCTGGTGGGAACCCTGGTGGGAACCCTGGTGGGGGATACAGTCACCAAAATCGTGGAGGTCAAGGAGGAGGTGGTGGTGGCAGTTATGGCAGTGGGTCATATCCTCCCCAAGGCCGGGGTGCACCTTATGCGTCAAATGGTATGCCCGGTGGTGGTCCACGTGGCGGGGGAGGTAGTGGCTATGGAGTTGGAGCTCCAAATTATCCTCAAGGCGCACCTTATGGTGGATCAGCAACAGGACGTGGATCAAACATGATGGGTGGTAACCGCAATCAACAGTATGGTTGGCAGCAGTAA 1554 0.4717 MAMAAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGSVMCQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEVVTSPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRHQPRQNEENAKRLKMQHPQQHTRLPPIQQTGQQQPQMRQGPNHPIHGSQPAVAAGPSHHYGKPRGPSGGPGRYPPGGNPGGNPGGGYSHQNRGGQGGGGGGSYGSGSYPPQGRGAPYASNGMPGGGPRGGGGSGYGVGAPNYPQGAPYGGSATGRGSNMMGGNRNQQYGWQQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02734 517 PANTHER CELL DIVISION PROTEIN KINASE 23 324 - -
Spst6g02734 517 SUPERFAMILY Protein kinase-like (PK-like) 19 326 IPR011009 -
Spst6g02734 517 MobiDBLite consensus disorder prediction 331 360 - -
Spst6g02734 517 MobiDBLite consensus disorder prediction 501 517 - -
Spst6g02734 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Spst6g02734 517 MobiDBLite consensus disorder prediction 366 388 - -
Spst6g02734 517 Pfam Protein kinase domain 25 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02734 517 ProSiteProfiles Protein kinase domain profile. 25 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02734 517 FunFam Cyclin-dependent kinase C-2 12 115 - -
Spst6g02734 517 FunFam Cyclin-dependent kinase C-2 116 358 - -
Spst6g02734 517 Gene3D Phosphorylase Kinase; domain 1 12 115 - -
Spst6g02734 517 Gene3D Transferase(Phosphotransferase) domain 1 116 358 - -
Spst6g02734 517 CDD STKc_CDK9_like 25 318 - -
Spst6g02734 517 MobiDBLite consensus disorder prediction 329 517 - -
Spst6g02734 517 SMART serkin_6 25 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02734 Spst-Chr6 98075794 98086389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02734 1 517 Core Cell Cycle Gene Families AT5G10270 74.812 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Spst6g02734 Pkinase 1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02734 K08819 - gmx:100793565 885.945