Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02711 ATGGATGAGGTTGTTTCTTCATTACAAGGCATAGCAGACAATGAACTCTGCCACATAACAGAAGATATTACTCCAGCTATATCAGATTCAAGAATTGGGCCACAAATAAATGGTTCAAAAGGTCCAACAATAAAAGAAGCTGGTCAGCCAAATCAGGAAGACGAGCAAATGGAGAGCATATTCAGTGGGGAGAAGTTAAGGCTAACAGTTGAGAATAATCTCTTTAACATAACAGACCAGCGAAACTCTGATAAACTGAGACATAATGAAGAACAGATGCAAAGCAGGTCCCGAGGAGAGGAGAGTAGCTCAGGAAAGATGATCACCAATGACCACACAATGGATGAGACAGAAGTTGATCAGCCGAGTGAGTTTGAAGAACAGATTCGAAGCACTCTACATATGGAGGGCATCACAAGGCCGAAAATTAGTGTTGATGGCATTATAGGTCACACAAAAGTTGACCAACTGAGCCATGATCAAGACGAAGGACAAAACATTGCTGAAATGGAGATAGGCTTAATACCAGCAACTATCAGTGCAATGATAGATCAAGTAGAAGTAGATCAACCGGTCCAGGATAAAACACAAACCCAGAGAAGCTGCCATGATAGTTTACAGGATGGATGCCAAGGTGAAATAATTTTAGAGAATTCGAAGTCCTCTGCATGCTCTATTTGCAAAAGTAGACGACCAAACAATGCATGGTCAGAAGACTTTACTTATGATGAACTGCTAAAAGCTACAGAAGCATTTTCCATTGATAACTCTCTATCTGAAAATGAAGATGGACCTACTTTCCAAGGCCTGCTAGAGAGACAGATAAAAATAGTTGTTAAAAAATATCAAATTAATTCCTCCCAAGAAGAGAAGATAATAAAGTCAGAAGCAAAGTTGTTCATCAGTGCTAGACATAAAAATGTGGTCATGCTGTTGGGTTTATGCACAAATAAAAGCCAACTGATGGTTGTGTTTGAGAAAGTATGCAACGGTTCACTTGACAAATACCTAACAAGGGGAAGTTTCCTGTCATTGAATTGGAAGCAAAGGCTGAAAGTAGCAATGGGTACTGCCAGAGGTTTAAAATACCTACATGGGAAAGATATAATCCATGGAAATCTAAAACCAAATAATATTCTTCTAACACATGAGTTTGAACCACTGATAGGAGATTTCTTCTTCGGACAAGAGAAAGTTGGACCAAAGAAATCCAGCAAAGATATAAGTATAAGAAATTCTGGATATGCAGCACCTGAATATCTGGAGAATGGAAAACTATCAAATAAGACAGATGTGTACTCCTTTGGATTGGTTCTATTAGAGCTGATCAGTGGCAGGAGGGCTACTGACAAATCACCAAGTGGAAAAAGCCTTGTTAGCTGGGCAAGGCCTCTCCTAAAAGGAAAGAAGTACCCACAGTTGTTGGATGTGAAAATCAATAACTCCTATGAAGAAGAAAAACTTGTATGGTTGGTCCAAGTAACAGAGCAATGTCTCAGAAAGAATCCTAAGGAAAGATTGACAATGAATATGGTTGTGTCTTCATTACAAGGTATAGAAGAATCAGCTGAGTGCTGTGTAACTGAAGATTCTTCTCCAGAAAATTCATATTTAAATGACCCTCCCATGACTAGTACACAAGGCCAAATGAAGGCCGAACCAGTGAAGAAGCAGAAAGAAGAATGGATTGACAGAAACCTACACGAGGAGGAAAGCAGCTCAAAATTGAGAGTCAAAACAAATCACTTGATAGGTCATGGAAATGAAGATCAGATGATACAGGGTGGAGAAGATGTGCAGAGAAGTCCCCATGAGGAGATGTTCAGAGTAACAACTATCAGCAATGACATGATTGATCAGATAAACCCTGACCAACAAATCCAGGAAAAACTGAATATCAACGGAAGCTTTGACATAGAAGAAACGGGTAAAATAGTAGATAAGCAACAAAAGTCGAGCAAGGATAAAAAACAAATAGAGGGAAGCTGTGATGATAGTTTGTTAAATGAGAATGAAGGGAAAATCATTTTGGAAAATTCTAAGTCTTCTGCTTGCTCAGTCTGCAAAAGTATGCGTCCAAACAGTAAATTGCAAAGGAAATATACTTATGAAGAGCTTCAAGCTTCTACAGAAGGATTTTCAATTAAGTATTCTCTATGTGAAGGTGAATATGGACCTGCTTTTAGAGGCCAACTAGATAATAACCAGGAAATAGTCATTAAGCAGCAAGCATTCACAAGCTTACAGGAACAGAAGGTGTTCATGTCAGAATTCCAATTGCTCATAAATGCTAGACATGAAAACGTGATCATGCTTTTGGGTTCATGTATACGATTAAGTCAATTGCTGATTGTGTATGAGAAGGCATGCAACGGTTCACTTGACCAGTACTTATCAAGAAAAAATGGTAGATCATTGACTTGGAGAGAAAGGATGAAAGTTGCAATAGGTGTTGCCCGAGGTCTAAAGTATCTACATGAGAATAATATAGTACATGGAGGAATAAAACCAAGTAACATTCTTCTAAATCATGACTTCAACCCACTGGTTGGAGATTTTGTGTTTGGAAAAGAAAGATGTGAATTGAAGAATCCAAGCAGGCTTAAGAGTTTGAGGAATTGTGGACGCACTGCACCAGAGTGTCAGGAGAGTGGAAAACAATCAACTAAGGCAGATGTATACTCTTTTGGTGTAGTTCTTCTGGAGTTGATCACTGGTCGTATGATTACAGAAAAAGTATCAGACACCAAATGTCCTGTTGAATGTATAAGGTCACTTCTTGAAGGACGAAAGTATCTACAGTTGGTGGATCCCAAAGTCAGCAGTTCCTATGATGAACAAAAACTAGTTTCATTGGTCCACGTATTAGAAAATTGTTTGAGAAAGAATCCAAAGGAAAGGTTCACAATGGATATGGTTGTCTCTGCACTGCCATCTATAGTAGATTTCAATGATATACATTCAAAGGAAGACTTTTCACCAGAAAACTCAAAGGTTTCAGATGTAACAAACTCAAAAGTTGAGGAGGAACCACTAAATGAAGAAGATTTAGGCACAGAGCATAGTGAGGGAAGAGAGGACAACATAACTTGCAGTGGAGGCAATGAAACAGAAATTTGTCAAGGGTGTGACAGAAACCCAACTTGTTGTGAAAATAGAAAGGAAACAGAAGAAAAGCAAAGCTTAAGCACCAAGGTATCTTGGGAAGGGTGCTTATCTTATGGTGGAGCTAAAGAATTTTATAACGAAGGGGCCAAAGAGTACACAGCATGTGAAGAATTTTTCGTCTGGTGTGATTTAATTTGA 3306 0.3869 MDEVVSSLQGIADNELCHITEDITPAISDSRIGPQINGSKGPTIKEAGQPNQEDEQMESIFSGEKLRLTVENNLFNITDQRNSDKLRHNEEQMQSRSRGEESSSGKMITNDHTMDETEVDQPSEFEEQIRSTLHMEGITRPKISVDGIIGHTKVDQLSHDQDEGQNIAEMEIGLIPATISAMIDQVEVDQPVQDKTQTQRSCHDSLQDGCQGEIILENSKSSACSICKSRRPNNAWSEDFTYDELLKATEAFSIDNSLSENEDGPTFQGLLERQIKIVVKKYQINSSQEEKIIKSEAKLFISARHKNVVMLLGLCTNKSQLMVVFEKVCNGSLDKYLTRGSFLSLNWKQRLKVAMGTARGLKYLHGKDIIHGNLKPNNILLTHEFEPLIGDFFFGQEKVGPKKSSKDISIRNSGYAAPEYLENGKLSNKTDVYSFGLVLLELISGRRATDKSPSGKSLVSWARPLLKGKKYPQLLDVKINNSYEEEKLVWLVQVTEQCLRKNPKERLTMNMVVSSLQGIEESAECCVTEDSSPENSYLNDPPMTSTQGQMKAEPVKKQKEEWIDRNLHEEESSSKLRVKTNHLIGHGNEDQMIQGGEDVQRSPHEEMFRVTTISNDMIDQINPDQQIQEKLNINGSFDIEETGKIVDKQQKSSKDKKQIEGSCDDSLLNENEGKIILENSKSSACSVCKSMRPNSKLQRKYTYEELQASTEGFSIKYSLCEGEYGPAFRGQLDNNQEIVIKQQAFTSLQEQKVFMSEFQLLINARHENVIMLLGSCIRLSQLLIVYEKACNGSLDQYLSRKNGRSLTWRERMKVAIGVARGLKYLHENNIVHGGIKPSNILLNHDFNPLVGDFVFGKERCELKNPSRLKSLRNCGRTAPECQESGKQSTKADVYSFGVVLLELITGRMITEKVSDTKCPVECIRSLLEGRKYLQLVDPKVSSSYDEQKLVSLVHVLENCLRKNPKERFTMDMVVSALPSIVDFNDIHSKEDFSPENSKVSDVTNSKVEEEPLNEEDLGTEHSEGREDNITCSGGNETEICQGCDRNPTCCENRKETEEKQSLSTKVSWEGCLSYGGAKEFYNEGAKEYTACEEFFVWCDLI 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02711 1101 SUPERFAMILY Protein kinase-like (PK-like) 695 977 IPR011009 -
Spst6g02711 1101 MobiDBLite consensus disorder prediction 30 54 - -
Spst6g02711 1101 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 328 529 - -
Spst6g02711 1101 Gene3D Transferase(Phosphotransferase) domain 1 328 538 - -
Spst6g02711 1101 Gene3D Transferase(Phosphotransferase) domain 1 790 1004 - -
Spst6g02711 1101 FunFam Proline-rich receptor-like protein kinase PERK8 214 327 - -
Spst6g02711 1101 MobiDBLite consensus disorder prediction 992 1028 - -
Spst6g02711 1101 FunFam Proline-rich receptor-like protein kinase PERK8 675 788 - -
Spst6g02711 1101 MobiDBLite consensus disorder prediction 530 556 - -
Spst6g02711 1101 MobiDBLite consensus disorder prediction 28 54 - -
Spst6g02711 1101 MobiDBLite consensus disorder prediction 530 552 - -
Spst6g02711 1101 ProSiteProfiles Protein kinase domain profile. 713 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02711 1101 MobiDBLite consensus disorder prediction 81 97 - -
Spst6g02711 1101 Gene3D Phosphorylase Kinase; domain 1 227 326 - -
Spst6g02711 1101 MobiDBLite consensus disorder prediction 992 1027 - -
Spst6g02711 1101 SMART serkin_6 252 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02711 1101 SMART serkin_6 713 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02711 1101 MobiDBLite consensus disorder prediction 79 123 - -
Spst6g02711 1101 Gene3D Phosphorylase Kinase; domain 1 674 787 - -
Spst6g02711 1101 ProSiteProfiles Protein kinase domain profile. 252 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02711 1101 PANTHER OS01G0253100 PROTEIN 110 522 - -
Spst6g02711 1101 SUPERFAMILY Protein kinase-like (PK-like) 237 521 IPR011009 -
Spst6g02711 1101 Pfam Protein tyrosine and serine/threonine kinase 715 977 IPR001245 GO:0004672|GO:0006468
Spst6g02711 1101 Pfam Protein tyrosine and serine/threonine kinase 264 516 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02711 Spst-Chr6 94851370 94860016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02711 213 550 Trihelix Transcription Factor Family AT5G38560 33.607 1.31e-51 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst6g02711 PK_Tyr_Ser-Thr 2.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02711 - - vun:114188408 1635.16