Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02710 AAGGAGAAATACCTACTGTGTTATGTGGAATGCCTCATTCAGAGTGGTGTTCCTCTTTTGGGAGGAGAAGAAGAAGATACGGTGACCCTAGTTGCCATCCTGCATGAGGTTTATACTCCTATGGGATACAGAATCACGTTGGATAACCGGTTGGTCGGGGTAAACCAGAGGATCATCGACAAAGAACTTGCAAAGAAGAAACAAGAGTACCTGAACAACGAGGAACTTGCTCAGATTGTTAAACAATATGAATCAAATAAGGTTGCATTTAAGATAAAGTTGTTTACAGGATCTTCACCAAAATTTGTGGCTTTAGAAGTGGCCATAGACCTAAATGCATCTTGGGTGATTCTTGACAGGAAAATGAAGAAAGACGAGGAGTTTTTCCTGCAGAGGCTTTCTTGTGGTATATCTATATTAAGGAGTAACGATCGGATTGCTCGACTAAGAGGGCCTTTAGATCTTCCAGATGAAATACCATGTAACAGCCATGAAACATATGATGAAAGTTTACCAAGTGTTCCATATAAACATCTTTTCGACATTGATGCTTTCCCCAAGAGTGAGTTCTGGAATATTTCTAATATTCTTGAACGCCTTATTACAACTAAGACCAATCTAATGATAGGAAAACTTGAAGATTGTGAACAGAACCATATACAAGATAGGCTCTACGAGGAAGAGGGTTGCTCGAATGTTCCGACCAATACTAGTGAAAAAATATATCAGACAAGTCGTAATCACCATAGCATGGATGGAACAGAAAGAAATAGTAATCAAATGATAGATAAAATAGAAAGAGACGGGCAAGGCCAAGATCAAGAACTGATGCAAATCATGCCCCATGAGATGGAGGAGGACACAACAATTATGATTAAACCTGATCAAGCAGCTGCTGGGAAAATAGCTGATCAACTGAGCCAAGATGAAGAAAAGACAAACAACTTCTTCCATGCACAGACTTTGAGCATTTCCAGTGGTGCTATATTGGATGATGGAGAGCAAGAGAAAAGTAATTTGGATTCAGTAAGCAATTTCTGCTCTGTCTGCGAAACAAGACGACCTAGTATTGGGTGGAAAAAGGAATTTACTTACGAAGAACTCCAAGCAGCCACAGATGCCTTTTCATTGAAGAACTGTCTCTCTGAAAGTGGATCCCTTTTCACTTTCAGAGGCCAGATGAAGGGAGGGATGAAACTAGTGGTTAAGCAGCATGATGTAACAAACACTCAAGTAAGGGAGAAAGTGAAGTCAGAAATCCAAACCATCCTCAAAGCTAGGCATAAGAATGTGATCATGCTATTGGGTTCATCTGCAGCAGAATCTTTCCTGCTTACTGTATATGAGTATGCCTGCAATGGTTCACTGGACAAATATCTATCAAAAGAAAGCTCCCGAACATTGACCTGGAAAGAAAGGAAAAGAGTGGCAATAGGCCTTGCCAGAGGCCTCAAGTACCTACATGAAAATAACATTGTTCATTCCAATATAAAACCAAGCAATATTCTTCTAACACATGACTTCGAACCACTGATTGGAGACTACAAGTTTGGAAAAGAACTTCCAGTGAAGTCCTACAAAAATAAAAGCAAAGGGAATTATGAATACGTAGCACCAGAATATCAGGAGAAGGGAAAATTATCATCAAAGGCAGATGTATACTCATTGGGTGTGGTTATTTTAGAGTTGATTACTGGACGAAGGACTGCAGATTTTATGTTAGAAGATAAAAGCCTTGTTGAATGGGCAAAGCCTCATCTTAAAAAGAAGAATTACTCAGAGTTGGTGGATCCCATACTCAGAAACTCATACGAAGAGGATCACCTTCGTTGGCTGGTCCAAGTAACAGCACAATGTCTAAAAAAGAATCCTAAGGAAAGATTATCAATGAATATGGACGAGAAGTGGCAAGTTTCCCTTGATGAGGAGATTGATTCAATAGCACAACATGTGGGAGTTGTCATATTTGTCGAGTGGTGCTTAGCCAATTG 1991 0.3973 KEKYLLCYVECLIQSGVPLLGGEEEDTVTLVAILHEVYTPMGYRITLDNRLVGVNQRIIDKELAKKKQEYLNNEELAQIVKQYESNKVAFKIKLFTGSSPKFVALEVAIDLNASWVILDRKMKKDEEFFLQRLSCGISILRSNDRIARLRGPLDLPDEIPCNSHETYDESLPSVPYKHLFDIDAFPKSEFWNISNILERLITTKTNLMIGKLEDCEQNHIQDRLYEEEGCSNVPTNTSEKIYQTSRNHHSMDGTERNSNQMIDKIERDGQGQDQELMQIMPHEMEEDTTIMIKPDQAAAGKIADQLSQDEEKTNNFFHAQTLSISSGAILDDGEQEKSNLDSVSNFCSVCETRRPSIGWKKEFTYEELQAATDAFSLKNCLSESGSLFTFRGQMKGGMKLVVKQHDVTNTQVREKVKSEIQTILKARHKNVIMLLGSSAAESFLLTVYEYACNGSLDKYLSKESSRTLTWKERKRVAIGLARGLKYLHENNIVHSNIKPSNILLTHDFEPLIGDYKFGKELPVKSYKNKSKGNYEYVAPEYQEKGKLSSKADVYSLGVVILELITGRRTADFMLEDKSLVEWAKPHLKKKNYSELVDPILRNSYEEDHLRWLVQVTAQCLKKNPKERLSMNMDEKWQVSLDEEIDSIAQHVGVVIFVEWCLAN 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02710 663 Gene3D Transferase(Phosphotransferase) domain 1 452 649 - -
Spst6g02710 663 Pfam Protein kinase domain 398 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02710 663 Coils Coil 663 663 - -
Spst6g02710 663 PANTHER OS01G0253100 PROTEIN 257 631 - -
Spst6g02710 663 FunFam Proline-rich receptor-like protein kinase PERK8 337 450 - -
Spst6g02710 663 SUPERFAMILY Protein kinase-like (PK-like) 359 632 IPR011009 -
Spst6g02710 663 ProSiteProfiles Protein kinase domain profile. 375 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g02710 663 Gene3D Phosphorylase Kinase; domain 1 348 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02710 Spst-Chr6 94829121 94849564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02710 363 645 Trihelix Transcription Factor Family AT5G38560 37.838 1.70e-56 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst6g02710 Pkinase 8.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g02710 - - gsj:114401847 883.634